EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0017824 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp3
Alias: AlphaCP-3
Full Name: poly(rC) binding protein 3
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 205763 bases
Position: chr10:76424740-76630502
Accession: 1890470
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0026342	KH_1	PF00013.29	3e-55	1	3
MGP_NZOHlLtJ_P0026342	KH_1	PF00013.29	3e-55	2	3
MGP_NZOHlLtJ_P0026342	KH_1	PF00013.29	3e-55	3	3
MGP_NZOHlLtJ_P0026339	KH_1	PF00013.29	3e-55	1	3
MGP_NZOHlLtJ_P0026339	KH_1	PF00013.29	3e-55	2	3
MGP_NZOHlLtJ_P0026339	KH_1	PF00013.29	3e-55	3	3
MGP_NZOHlLtJ_P0026341	KH_1	PF00013.29	3e-55	1	3
MGP_NZOHlLtJ_P0026341	KH_1	PF00013.29	3e-55	2	3
MGP_NZOHlLtJ_P0026341	KH_1	PF00013.29	3e-55	3	3
MGP_NZOHlLtJ_P0026344	KH_1	PF00013.29	7.8e-19	1	1
MGP_NZOHlLtJ_P0026342	KH_2	PF07650.17	3.9e-15	1	1
MGP_NZOHlLtJ_P0026339	KH_2	PF07650.17	3.9e-15	1	1
MGP_NZOHlLtJ_P0026341	KH_2	PF07650.17	3.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0026338	-	2065	XM_006513916	MGP_NZOHlLtJ_P0026338	394 (aa)	XP_006513979	P57722
MGP_NZOHlLtJ_T0026339	-	2013	-	MGP_NZOHlLtJ_P0026339	371 (aa)	-	-
MGP_NZOHlLtJ_T0026341	-	1748	-	MGP_NZOHlLtJ_P0026341	371 (aa)	-	-
MGP_NZOHlLtJ_T0026340	-	1736	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0026343	-	1095	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0026342	-	2544	-	MGP_NZOHlLtJ_P0026342	370 (aa)	-	-
MGP_NZOHlLtJ_T0026345	-	944	-	MGP_NZOHlLtJ_P0026345	226 (aa)	-	-
MGP_NZOHlLtJ_T0026344	-	605	-	MGP_NZOHlLtJ_P0026344	160 (aa)	-	-
MGP_NZOHlLtJ_T0026347	-	337	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0026346	-	717	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0017824's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0017824's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0017824	Pcbp3	99	82.143	MGP_NZOHlLtJ_G0022842	Pcbp2	99	78.338
MGP_NZOHlLtJ_G0017824	Pcbp3	86	35.000	MGP_NZOHlLtJ_G0031186	Igf2bp3	59	33.813
MGP_NZOHlLtJ_G0017824	Pcbp3	72	40.351	MGP_NZOHlLtJ_G0020143	Nova1	59	40.351
MGP_NZOHlLtJ_G0017824	Pcbp3	66	31.250	MGP_NZOHlLtJ_G0028461	Fubp1	72	33.019
MGP_NZOHlLtJ_G0017824	Pcbp3	99	65.873	MGP_NZOHlLtJ_G0031441	Pcbp1	99	68.033
MGP_NZOHlLtJ_G0017824	Pcbp3	89	36.765	MGP_NZOHlLtJ_G0023094	Igf2bp2	62	33.333
MGP_NZOHlLtJ_G0017824	Pcbp3	85	31.973	MGP_NZOHlLtJ_G0026063	Fubp3	77	31.973
MGP_NZOHlLtJ_G0017824	Pcbp3	85	69.811	MGP_NZOHlLtJ_G0035746	-	93	70.652
MGP_NZOHlLtJ_G0017824	Pcbp3	66	33.582	MGP_NZOHlLtJ_G0019426	Igf2bp1	60	33.333
MGP_NZOHlLtJ_G0017824	Pcbp3	79	41.667	MGP_NZOHlLtJ_G0021060	Hnrnpk	77	50.649