EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0017921 (Gene tree)
Gene ID: -
Gene Symbol: Cirbp
Alias: Cirp|R74941
Full Name: cold inducible RNA binding protein
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 7944 bases
Position: chr10:80036467-80044410
Accession: 893588
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0026688	RRM_1	PF00076.22	5.1e-26	1	1
MGP_NZOHlLtJ_P0026690	RRM_1	PF00076.22	1.2e-25	1	1
MGP_NZOHlLtJ_P0026689	RRM_1	PF00076.22	1.3e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0026694	-	593	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0026693	-	894	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0026692	-	912	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0026691	-	376	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0026690	-	840	-	MGP_NZOHlLtJ_P0026690	168 (aa)	-	-
MGP_NZOHlLtJ_T0026688	-	423	XM_006513164	MGP_NZOHlLtJ_P0026688	108 (aa)	XP_006513227	P60824
MGP_NZOHlLtJ_T0026689	-	1321	-	MGP_NZOHlLtJ_P0026689	172 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0017921's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0017921's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0017921	Cirbp	84	31.868	MGP_NZOHlLtJ_G0027292	Srsf6	61	31.868
MGP_NZOHlLtJ_G0017921	Cirbp	99	60.000	MGP_NZOHlLtJ_G0036057	Rbm3	100	62.941
MGP_NZOHlLtJ_G0017921	Cirbp	91	39.759	MGP_NZOHlLtJ_G0027313	Pabpc1l	53	39.759
MGP_NZOHlLtJ_G0017921	Cirbp	79	37.500	MGP_NZOHlLtJ_G0034984	Elavl3	62	37.500
MGP_NZOHlLtJ_G0017921	Cirbp	91	35.714	MGP_NZOHlLtJ_G0031438	Tia1	80	37.778
MGP_NZOHlLtJ_G0017921	Cirbp	85	38.043	MGP_NZOHlLtJ_G0023153	Ncbp2	54	36.471
MGP_NZOHlLtJ_G0017921	Cirbp	94	38.614	MGP_NZOHlLtJ_G0021054	Hnrnpa0	56	43.421
MGP_NZOHlLtJ_G0017921	Cirbp	73	36.709	MGP_NZOHlLtJ_G0030246	Hnrnpdl	54	36.709
MGP_NZOHlLtJ_G0017921	Cirbp	83	38.776	MGP_NZOHlLtJ_G0030244	Hnrnpd	84	36.559
MGP_NZOHlLtJ_G0017921	Cirbp	81	32.955	MGP_NZOHlLtJ_G0023903	Srsf3	67	32.955
MGP_NZOHlLtJ_G0017921	Cirbp	85	40.244	MGP_NZOHlLtJ_G0033595	Tial1	67	40.244
MGP_NZOHlLtJ_G0017921	Cirbp	78	40.476	MGP_NZOHlLtJ_G0027432	Rbm38	74	38.043
MGP_NZOHlLtJ_G0017921	Cirbp	70	44.737	MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	50	44.737
MGP_NZOHlLtJ_G0017921	Cirbp	76	37.500	MGP_NZOHlLtJ_G0028903	Elavl2	64	37.500
MGP_NZOHlLtJ_G0017921	Cirbp	82	33.333	MGP_NZOHlLtJ_G0033843	Elavl1	75	33.333
MGP_NZOHlLtJ_G0017921	Cirbp	77	35.294	MGP_NZOHlLtJ_G0024589	-	50	34.483
MGP_NZOHlLtJ_G0017921	Cirbp	80	41.860	MGP_NZOHlLtJ_G0026332	Hnrnpa3	57	44.737
MGP_NZOHlLtJ_G0017921	Cirbp	88	43.243	MGP_NZOHlLtJ_G0019357	Msi2	61	41.429
MGP_NZOHlLtJ_G0017921	Cirbp	79	63.529	MGP_NZOHlLtJ_G0036263	Rbmx	83	63.529
MGP_NZOHlLtJ_G0017921	Cirbp	68	34.247	MGP_NZOHlLtJ_G0021825	Pspc1	69	41.304
MGP_NZOHlLtJ_G0017921	Cirbp	79	41.270	MGP_NZOHlLtJ_G0029200	Pabpc4	52	32.184
MGP_NZOHlLtJ_G0017921	Cirbp	87	40.351	MGP_NZOHlLtJ_G0030440	Msi1	51	38.983
MGP_NZOHlLtJ_G0017921	Cirbp	84	38.889	MGP_NZOHlLtJ_G0029034	Elavl4	70	38.889
MGP_NZOHlLtJ_G0017921	Cirbp	80	32.558	MGP_NZOHlLtJ_G0025805	Celf2	82	33.333
MGP_NZOHlLtJ_G0017921	Cirbp	92	42.105	MGP_NZOHlLtJ_G0017927	Dazap1	74	47.273