EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0018387 (Gene tree)
Gene ID: -
Gene Symbol: Patz1
Alias: 8430401L15Rik|AI447519|MAZR|Mazr|POZ-AT hook-zinc finger protein|Patz|Zfp278|Zfp278GN|mazr
Full Name: POZ (BTB) and AT hook containing zinc finger 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 20196 bases
Position: chr11:213520-233715
Accession: 1891832
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0028147	zf-C2H2	PF00096.26	4e-26	1	5
MGP_NZOHlLtJ_P0028147	zf-C2H2	PF00096.26	4e-26	2	5
MGP_NZOHlLtJ_P0028147	zf-C2H2	PF00096.26	4e-26	3	5
MGP_NZOHlLtJ_P0028147	zf-C2H2	PF00096.26	4e-26	4	5
MGP_NZOHlLtJ_P0028147	zf-C2H2	PF00096.26	4e-26	5	5
MGP_NZOHlLtJ_P0028149	zf-C2H2	PF00096.26	5.1e-20	1	4
MGP_NZOHlLtJ_P0028149	zf-C2H2	PF00096.26	5.1e-20	2	4
MGP_NZOHlLtJ_P0028149	zf-C2H2	PF00096.26	5.1e-20	3	4
MGP_NZOHlLtJ_P0028149	zf-C2H2	PF00096.26	5.1e-20	4	4
MGP_NZOHlLtJ_P0028150	zf-C2H2	PF00096.26	1.9e-16	1	3
MGP_NZOHlLtJ_P0028150	zf-C2H2	PF00096.26	1.9e-16	2	3
MGP_NZOHlLtJ_P0028150	zf-C2H2	PF00096.26	1.9e-16	3	3
MGP_NZOHlLtJ_P0028148	zf-C2H2	PF00096.26	2.2e-15	1	3
MGP_NZOHlLtJ_P0028148	zf-C2H2	PF00096.26	2.2e-15	2	3
MGP_NZOHlLtJ_P0028148	zf-C2H2	PF00096.26	2.2e-15	3	3
MGP_NZOHlLtJ_P0028147	zf-met	PF12874.7	3.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0028150	-	3173	-	MGP_NZOHlLtJ_P0028150	537 (aa)	-	-
MGP_NZOHlLtJ_T0028154	-	495	-	MGP_NZOHlLtJ_P0028154	70 (aa)	-	-
MGP_NZOHlLtJ_T0028145	-	844	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0028144	-	1853	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0028147	-	3702	-	MGP_NZOHlLtJ_P0028147	687 (aa)	-	-
MGP_NZOHlLtJ_T0028146	-	1904	-	MGP_NZOHlLtJ_P0028146	102 (aa)	-	-
MGP_NZOHlLtJ_T0028152	-	456	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0028153	-	652	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0028143	-	798	NR_045109	-	- (aa)	-	-
MGP_NZOHlLtJ_T0028151	-	1249	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0028149	-	3118	-	MGP_NZOHlLtJ_P0028149	641 (aa)	-	-
MGP_NZOHlLtJ_T0028148	-	2930	-	MGP_NZOHlLtJ_P0028148	537 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0018387	Patz1	88	36.232	MGP_NZOHlLtJ_G0024446	Zbtb14	90	38.889