EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0018640 (Gene tree)
Gene ID: -
Gene Symbol: Irgm1
Alias: Ifggd3|Ifi1|Iigp3|Iipg3|Irgm|LRG-47
Full Name: immunity-related GTPase family M member 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 9700 bases
Position: chr11:47582563-47592262
Accession: 107567
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0029213	MMR_HSR1	PF01926.23	5.7e-05	1	1
MGP_NZOHlLtJ_P0029212	MMR_HSR1	PF01926.23	9.9e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0029212	-	2271	-	MGP_NZOHlLtJ_P0029212	409 (aa)	-	-
MGP_NZOHlLtJ_T0029213	-	1213	-	MGP_NZOHlLtJ_P0029213	288 (aa)	-	-
MGP_NZOHlLtJ_T0029211	-	3832	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0018640's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0018640's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0018640	Irgm1	65	39.175	MGP_NZOHlLtJ_G0024919	F830016B08Rik	72	34.000
MGP_NZOHlLtJ_G0018640	Irgm1	79	36.864	MGP_NZOHlLtJ_G0024917	Gm4951	77	33.013
MGP_NZOHlLtJ_G0018640	Irgm1	76	35.169	MGP_NZOHlLtJ_G0032308	Irgc1	71	30.183
MGP_NZOHlLtJ_G0018640	Irgm1	83	62.185	MGP_NZOHlLtJ_G0018781	Irgm2	92	50.135
MGP_NZOHlLtJ_G0018640	Irgm1	89	56.031	MGP_NZOHlLtJ_G0018780	Igtp	90	49.740
MGP_NZOHlLtJ_G0018640	Irgm1	93	33.696	MGP_NZOHlLtJ_G0024920	Iigp1	79	32.515
MGP_NZOHlLtJ_G0018640	Irgm1	82	39.095	MGP_NZOHlLtJ_G0018648	-	72	36.667
MGP_NZOHlLtJ_G0018640	Irgm1	82	39.095	MGP_NZOHlLtJ_G0018649	-	72	36.667
MGP_NZOHlLtJ_G0018640	Irgm1	95	30.976	MGP_NZOHlLtJ_G0018644	Ifi47	97	30.976
MGP_NZOHlLtJ_G0018640	Irgm1	83	36.694	MGP_NZOHlLtJ_G0018646	9930111J21Rik2	71	31.025