EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0018682 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnph1
Alias: AI642080|E430005G16Rik|Hnrnph|Hnrph|Hnrph1|Hnrph1 {ECO:0000313|EMBL:AAH42187.2,GN ECO:0000313|MGI:MGI:1891925}
Full Name: heterogeneous nuclear ribonucleoprotein H1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 9538 bases
Position: chr11:49274427-49283964
Accession: 1891925
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0029340	zf-RNPHF	PF08080.12	1.3e-22	1	1
MGP_NZOHlLtJ_P0029341	zf-RNPHF	PF08080.12	1.3e-22	1	1
MGP_NZOHlLtJ_P0029346	zf-RNPHF	PF08080.12	1.5e-22	1	1
MGP_NZOHlLtJ_P0029340	RRM_1	PF00076.22	2.1e-32	1	3
MGP_NZOHlLtJ_P0029340	RRM_1	PF00076.22	2.1e-32	2	3
MGP_NZOHlLtJ_P0029340	RRM_1	PF00076.22	2.1e-32	3	3
MGP_NZOHlLtJ_P0029341	RRM_1	PF00076.22	2.1e-32	1	3
MGP_NZOHlLtJ_P0029341	RRM_1	PF00076.22	2.1e-32	2	3
MGP_NZOHlLtJ_P0029341	RRM_1	PF00076.22	2.1e-32	3	3
MGP_NZOHlLtJ_P0029346	RRM_1	PF00076.22	2.6e-32	1	3
MGP_NZOHlLtJ_P0029346	RRM_1	PF00076.22	2.6e-32	2	3
MGP_NZOHlLtJ_P0029346	RRM_1	PF00076.22	2.6e-32	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0029348	-	582	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029349	-	860	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029354	-	163	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029340	-	2408	XM_006533875	MGP_NZOHlLtJ_P0029340	449 (aa)	XP_006533938	O35737
MGP_NZOHlLtJ_T0029341	-	2223	-	MGP_NZOHlLtJ_P0029341	449 (aa)	-	-
MGP_NZOHlLtJ_T0029342	-	4576	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029343	-	581	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029344	-	4003	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029345	-	870	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029346	-	2124	-	MGP_NZOHlLtJ_P0029346	472 (aa)	-	-
MGP_NZOHlLtJ_T0029347	-	1116	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029352	-	582	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029353	-	914	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029351	-	837	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029357	-	676	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029356	-	814	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029350	-	1724	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029355	-	159	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0018682	Hnrnph1	60	64.474	MGP_NZOHlLtJ_G0030175	Grsf1	92	65.333
MGP_NZOHlLtJ_G0018682	Hnrnph1	90	92.369	MGP_NZOHlLtJ_G0036598	-	100	92.369
MGP_NZOHlLtJ_G0018682	Hnrnph1	90	60.923	MGP_NZOHlLtJ_G0017744	Hnrnph3	99	59.673