EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0018688 (Gene tree)
Gene ID: -
Gene Symbol: Zfp454
Alias: B230342N19
Full Name: zinc finger protein 454
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 20746 bases
Position: chr11:49776315-49797060
Accession: 2679253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0029377	zf-C2H2	PF00096.26	7.7e-63	1	11
MGP_NZOHlLtJ_P0029377	zf-C2H2	PF00096.26	7.7e-63	2	11
MGP_NZOHlLtJ_P0029377	zf-C2H2	PF00096.26	7.7e-63	3	11
MGP_NZOHlLtJ_P0029377	zf-C2H2	PF00096.26	7.7e-63	4	11
MGP_NZOHlLtJ_P0029377	zf-C2H2	PF00096.26	7.7e-63	5	11
MGP_NZOHlLtJ_P0029377	zf-C2H2	PF00096.26	7.7e-63	6	11
MGP_NZOHlLtJ_P0029377	zf-C2H2	PF00096.26	7.7e-63	7	11
MGP_NZOHlLtJ_P0029377	zf-C2H2	PF00096.26	7.7e-63	8	11
MGP_NZOHlLtJ_P0029377	zf-C2H2	PF00096.26	7.7e-63	9	11
MGP_NZOHlLtJ_P0029377	zf-C2H2	PF00096.26	7.7e-63	10	11
MGP_NZOHlLtJ_P0029377	zf-C2H2	PF00096.26	7.7e-63	11	11
MGP_NZOHlLtJ_P0029377	zf-met	PF12874.7	0.00059	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0029379	-	722	-	MGP_NZOHlLtJ_P0029379	122 (aa)	-	-
MGP_NZOHlLtJ_T0029378	-	579	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029380	-	606	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029377	-	1819	XM_006533208	MGP_NZOHlLtJ_P0029377	536 (aa)	XP_006533271	Q5NCH5

Gene Model

Click here to download MGP_NZOHlLtJ_G0018688's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0018688's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0018688	Zfp454	75	42.697	MGP_NZOHlLtJ_G0025063	Zfp236	63	42.697
MGP_NZOHlLtJ_G0018688	Zfp454	98	44.373	MGP_NZOHlLtJ_G0033547	-	82	44.373
MGP_NZOHlLtJ_G0018688	Zfp454	68	38.571	MGP_NZOHlLtJ_G0031296	Prdm5	78	38.571
MGP_NZOHlLtJ_G0018688	Zfp454	80	36.599	MGP_NZOHlLtJ_G0031165	Repin1	95	35.252
MGP_NZOHlLtJ_G0018688	Zfp454	99	52.464	MGP_NZOHlLtJ_G0032299	Zfp111	75	52.464
MGP_NZOHlLtJ_G0018688	Zfp454	73	52.000	MGP_NZOHlLtJ_G0021128	Rslcan18	71	52.000
MGP_NZOHlLtJ_G0018688	Zfp454	100	52.922	MGP_NZOHlLtJ_G0023687	Zfp947	95	62.745
MGP_NZOHlLtJ_G0018688	Zfp454	68	48.485	MGP_NZOHlLtJ_G0020694	Zkscan4	55	52.500
MGP_NZOHlLtJ_G0018688	Zfp454	98	41.509	MGP_NZOHlLtJ_G0034279	Zfp882	99	44.110
MGP_NZOHlLtJ_G0018688	Zfp454	68	51.095	MGP_NZOHlLtJ_G0033545	Zfp768	51	50.523
MGP_NZOHlLtJ_G0018688	Zfp454	98	43.782	MGP_NZOHlLtJ_G0027372	Zfp334	99	46.462
MGP_NZOHlLtJ_G0018688	Zfp454	69	60.345	MGP_NZOHlLtJ_G0031645	Zfp637	80	55.208
MGP_NZOHlLtJ_G0018688	Zfp454	88	49.008	MGP_NZOHlLtJ_G0032296	Zfp112	73	57.143
MGP_NZOHlLtJ_G0018688	Zfp454	98	50.836	MGP_NZOHlLtJ_G0032301	Zfp108	99	50.418
MGP_NZOHlLtJ_G0018688	Zfp454	98	50.704	MGP_NZOHlLtJ_G0032303	Zfp94	97	50.704
MGP_NZOHlLtJ_G0018688	Zfp454	76	55.172	MGP_NZOHlLtJ_G0032302	Zfp61	99	53.226
MGP_NZOHlLtJ_G0018688	Zfp454	81	53.521	MGP_NZOHlLtJ_G0032591	-	70	55.556
MGP_NZOHlLtJ_G0018688	Zfp454	99	46.701	MGP_NZOHlLtJ_G0023675	Zfp677	99	49.315
MGP_NZOHlLtJ_G0018688	Zfp454	99	46.361	MGP_NZOHlLtJ_G0023698	Zfp945	99	46.479
MGP_NZOHlLtJ_G0018688	Zfp454	69	39.130	MGP_NZOHlLtJ_G0019420	Zfp652	56	38.596
MGP_NZOHlLtJ_G0018688	Zfp454	70	35.714	MGP_NZOHlLtJ_G0032333	Zfp574	88	37.500
MGP_NZOHlLtJ_G0018688	Zfp454	70	52.258	MGP_NZOHlLtJ_G0032405	Zfp974	90	49.858
MGP_NZOHlLtJ_G0018688	Zfp454	98	50.142	MGP_NZOHlLtJ_G0021145	Zfp748	100	50.142
MGP_NZOHlLtJ_G0018688	Zfp454	70	41.854	MGP_NZOHlLtJ_G0023705	Zscan10	75	44.554
MGP_NZOHlLtJ_G0018688	Zfp454	99	45.385	MGP_NZOHlLtJ_G0033548	E430018J23Rik	89	45.385
MGP_NZOHlLtJ_G0018688	Zfp454	99	53.604	MGP_NZOHlLtJ_G0022440	Zfp251	95	51.948
MGP_NZOHlLtJ_G0018688	Zfp454	67	42.623	MGP_NZOHlLtJ_G0032049	Zfp865	80	36.486
MGP_NZOHlLtJ_G0018688	Zfp454	68	38.320	MGP_NZOHlLtJ_G0018784	Zfp672	90	42.029
MGP_NZOHlLtJ_G0018688	Zfp454	98	45.814	MGP_NZOHlLtJ_G0034991	Zfp872	99	45.814
MGP_NZOHlLtJ_G0018688	Zfp454	68	45.745	MGP_NZOHlLtJ_G0027410	Zfp64	73	35.125
MGP_NZOHlLtJ_G0018688	Zfp454	71	57.803	MGP_NZOHlLtJ_G0032468	Zfp420	98	59.532
MGP_NZOHlLtJ_G0018688	Zfp454	99	45.143	MGP_NZOHlLtJ_G0023686	Zfp820	97	40.325
MGP_NZOHlLtJ_G0018688	Zfp454	65	42.424	MGP_NZOHlLtJ_G0029511	Zbtb17	55	43.322
MGP_NZOHlLtJ_G0018688	Zfp454	100	55.556	MGP_NZOHlLtJ_G0026939	Zfp661	98	55.405
MGP_NZOHlLtJ_G0018688	Zfp454	98	52.692	MGP_NZOHlLtJ_G0021129	Zfp759	100	52.692
MGP_NZOHlLtJ_G0018688	Zfp454	98	48.828	MGP_NZOHlLtJ_G0034655	Zfp1	99	48.828
MGP_NZOHlLtJ_G0018688	Zfp454	65	47.423	MGP_NZOHlLtJ_G0029971	Zbtb49	63	50.000
MGP_NZOHlLtJ_G0018688	Zfp454	100	52.367	MGP_NZOHlLtJ_G0018696	Zfp354a	99	51.743
MGP_NZOHlLtJ_G0018688	Zfp454	72	37.600	MGP_NZOHlLtJ_G0034497	Zfp319	91	37.989
MGP_NZOHlLtJ_G0018688	Zfp454	67	51.309	MGP_NZOHlLtJ_G0032041	Zfp628	60	49.451
MGP_NZOHlLtJ_G0018688	Zfp454	100	49.851	MGP_NZOHlLtJ_G0023677	Zfp51	95	46.910
MGP_NZOHlLtJ_G0018688	Zfp454	98	49.583	MGP_NZOHlLtJ_G0018832	Zfp867	95	49.583
MGP_NZOHlLtJ_G0018688	Zfp454	87	48.199	MGP_NZOHlLtJ_G0032611	Zfp715	61	57.778