EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0018696 (Gene tree)
Gene ID: -
Gene Symbol: Zfp354a
Alias: AW488485|Tcf17|Znf354a|kid1
Full Name: zinc finger protein 354A
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 13734 bases
Position: chr11:49995453-50009186
Accession: 103172
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	1	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	2	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	3	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	4	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	5	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	6	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	7	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	8	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	9	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	10	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	11	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	12	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	13	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	14	15
MGP_NZOHlLtJ_P0029399	zf-C2H2	PF00096.26	3.4e-77	15	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	1	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	2	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	3	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	4	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	5	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	6	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	7	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	8	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	9	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	10	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	11	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	12	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	13	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	14	15
MGP_NZOHlLtJ_P0029397	zf-C2H2	PF00096.26	3.5e-77	15	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	1	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	2	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	3	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	4	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	5	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	6	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	7	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	8	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	9	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	10	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	11	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	12	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	13	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	14	15
MGP_NZOHlLtJ_P0029401	zf-C2H2	PF00096.26	3.5e-77	15	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	1	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	2	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	3	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	4	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	5	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	6	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	7	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	8	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	9	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	10	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	11	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	12	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	13	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	14	15
MGP_NZOHlLtJ_P0029400	zf-C2H2	PF00096.26	3.6e-77	15	15
MGP_NZOHlLtJ_P0029399	zf-met	PF12874.7	1.8e-07	1	1
MGP_NZOHlLtJ_P0029397	zf-met	PF12874.7	1.9e-07	1	1
MGP_NZOHlLtJ_P0029401	zf-met	PF12874.7	1.9e-07	1	1
MGP_NZOHlLtJ_P0029400	zf-met	PF12874.7	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0029400	-	2247	-	MGP_NZOHlLtJ_P0029400	629 (aa)	-	-
MGP_NZOHlLtJ_T0029399	-	4333	-	MGP_NZOHlLtJ_P0029399	627 (aa)	-	-
MGP_NZOHlLtJ_T0029398	-	429	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0029397	-	2760	XM_006532787	MGP_NZOHlLtJ_P0029397	628 (aa)	XP_006532850	Q61751
MGP_NZOHlLtJ_T0029401	-	2054	-	MGP_NZOHlLtJ_P0029401	628 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0018696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0018696's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0018696	Zfp354a	99	47.506	MGP_NZOHlLtJ_G0032296	Zfp112	99	47.506
MGP_NZOHlLtJ_G0018696	Zfp354a	99	51.732	MGP_NZOHlLtJ_G0032299	Zfp111	99	51.732
MGP_NZOHlLtJ_G0018696	Zfp354a	98	50.806	MGP_NZOHlLtJ_G0032302	Zfp61	96	48.515
MGP_NZOHlLtJ_G0018696	Zfp354a	99	56.557	MGP_NZOHlLtJ_G0026939	Zfp661	95	56.557
MGP_NZOHlLtJ_G0018696	Zfp354a	72	44.444	MGP_NZOHlLtJ_G0029511	Zbtb17	62	42.810
MGP_NZOHlLtJ_G0018696	Zfp354a	76	47.458	MGP_NZOHlLtJ_G0032049	Zfp865	82	47.458
MGP_NZOHlLtJ_G0018696	Zfp354a	72	48.558	MGP_NZOHlLtJ_G0032041	Zfp628	60	48.810
MGP_NZOHlLtJ_G0018696	Zfp354a	72	42.222	MGP_NZOHlLtJ_G0027410	Zfp64	70	33.553
MGP_NZOHlLtJ_G0018696	Zfp354a	74	34.868	MGP_NZOHlLtJ_G0016992	Zbtb41	63	34.868
MGP_NZOHlLtJ_G0018696	Zfp354a	98	52.365	MGP_NZOHlLtJ_G0032303	Zfp94	99	52.365
MGP_NZOHlLtJ_G0018696	Zfp354a	99	55.556	MGP_NZOHlLtJ_G0023686	Zfp820	97	55.556
MGP_NZOHlLtJ_G0018696	Zfp354a	76	48.454	MGP_NZOHlLtJ_G0029971	Zbtb49	61	47.222
MGP_NZOHlLtJ_G0018696	Zfp354a	72	41.966	MGP_NZOHlLtJ_G0023705	Zscan10	75	41.966
MGP_NZOHlLtJ_G0018696	Zfp354a	99	51.743	MGP_NZOHlLtJ_G0018688	Zfp454	100	52.367
MGP_NZOHlLtJ_G0018696	Zfp354a	99	46.829	MGP_NZOHlLtJ_G0023698	Zfp945	99	46.570
MGP_NZOHlLtJ_G0018696	Zfp354a	98	43.580	MGP_NZOHlLtJ_G0021129	Zfp759	99	44.854
MGP_NZOHlLtJ_G0018696	Zfp354a	73	40.361	MGP_NZOHlLtJ_G0018784	Zfp672	99	42.500
MGP_NZOHlLtJ_G0018696	Zfp354a	99	46.429	MGP_NZOHlLtJ_G0027372	Zfp334	99	46.067
MGP_NZOHlLtJ_G0018696	Zfp354a	74	37.405	MGP_NZOHlLtJ_G0034497	Zfp319	91	38.520
MGP_NZOHlLtJ_G0018696	Zfp354a	99	45.012	MGP_NZOHlLtJ_G0023687	Zfp947	99	44.477
MGP_NZOHlLtJ_G0018696	Zfp354a	99	51.440	MGP_NZOHlLtJ_G0034655	Zfp1	99	51.440
MGP_NZOHlLtJ_G0018696	Zfp354a	99	49.886	MGP_NZOHlLtJ_G0023677	Zfp51	94	50.106
MGP_NZOHlLtJ_G0018696	Zfp354a	98	44.808	MGP_NZOHlLtJ_G0021145	Zfp748	99	51.220
MGP_NZOHlLtJ_G0018696	Zfp354a	79	46.341	MGP_NZOHlLtJ_G0032405	Zfp974	99	46.000
MGP_NZOHlLtJ_G0018696	Zfp354a	84	47.674	MGP_NZOHlLtJ_G0034279	Zfp882	99	47.674
MGP_NZOHlLtJ_G0018696	Zfp354a	79	37.217	MGP_NZOHlLtJ_G0031296	Prdm5	85	37.217
MGP_NZOHlLtJ_G0018696	Zfp354a	74	40.625	MGP_NZOHlLtJ_G0031165	Repin1	95	33.643
MGP_NZOHlLtJ_G0018696	Zfp354a	79	52.586	MGP_NZOHlLtJ_G0031645	Zfp637	86	51.462
MGP_NZOHlLtJ_G0018696	Zfp354a	72	37.203	MGP_NZOHlLtJ_G0032333	Zfp574	93	38.168
MGP_NZOHlLtJ_G0018696	Zfp354a	82	52.796	MGP_NZOHlLtJ_G0032591	-	75	52.796
MGP_NZOHlLtJ_G0018696	Zfp354a	95	50.282	MGP_NZOHlLtJ_G0034991	Zfp872	99	47.815
MGP_NZOHlLtJ_G0018696	Zfp354a	99	50.174	MGP_NZOHlLtJ_G0021128	Rslcan18	83	50.174
MGP_NZOHlLtJ_G0018696	Zfp354a	76	57.143	MGP_NZOHlLtJ_G0032468	Zfp420	99	57.143
MGP_NZOHlLtJ_G0018696	Zfp354a	98	41.343	MGP_NZOHlLtJ_G0023675	Zfp677	99	42.977
MGP_NZOHlLtJ_G0018696	Zfp354a	99	42.031	MGP_NZOHlLtJ_G0022440	Zfp251	95	42.031
MGP_NZOHlLtJ_G0018696	Zfp354a	76	43.429	MGP_NZOHlLtJ_G0031750	Zfp384	52	43.429
MGP_NZOHlLtJ_G0018696	Zfp354a	72	54.182	MGP_NZOHlLtJ_G0033545	Zfp768	55	51.342
MGP_NZOHlLtJ_G0018696	Zfp354a	98	42.522	MGP_NZOHlLtJ_G0033547	-	82	42.522
MGP_NZOHlLtJ_G0018696	Zfp354a	100	46.341	MGP_NZOHlLtJ_G0033548	E430018J23Rik	89	46.341
MGP_NZOHlLtJ_G0018696	Zfp354a	99	46.847	MGP_NZOHlLtJ_G0032301	Zfp108	99	52.603
MGP_NZOHlLtJ_G0018696	Zfp354a	72	47.577	MGP_NZOHlLtJ_G0020694	Zkscan4	56	48.908
MGP_NZOHlLtJ_G0018696	Zfp354a	100	49.118	MGP_NZOHlLtJ_G0032611	Zfp715	96	49.118
MGP_NZOHlLtJ_G0018696	Zfp354a	98	49.329	MGP_NZOHlLtJ_G0018832	Zfp867	96	49.329