EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0019295 (Gene tree)
Gene ID: -
Gene Symbol: Ddx52
Alias: 2700029C06Rik|ROK1|Rok1
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 52
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 22112 bases
Position: chr11:84795544-84817655
Accession: 1925644
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0031782	ResIII	PF04851.15	8.9e-06	1	1
MGP_NZOHlLtJ_P0031782	DEAD	PF00270.29	5.4e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0031783	-	553	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0031782	-	3194	-	MGP_NZOHlLtJ_P0031782	598 (aa)	-	Q8K301

Gene Model

Click here to download MGP_NZOHlLtJ_G0019295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0019295's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0019295	Ddx52	60	31.768	MGP_NZOHlLtJ_G0018979	Eif4a1	74	31.476
MGP_NZOHlLtJ_G0019295	Ddx52	61	30.597	MGP_NZOHlLtJ_G0018451	Ddx56	80	33.493
MGP_NZOHlLtJ_G0019295	Ddx52	73	32.648	MGP_NZOHlLtJ_G0016981	Ddx59	64	33.741
MGP_NZOHlLtJ_G0019295	Ddx52	68	30.456	MGP_NZOHlLtJ_G0022501	Ddx17	62	30.843
MGP_NZOHlLtJ_G0019295	Ddx52	68	30.733	MGP_NZOHlLtJ_G0021029	Ddx41	66	30.733
MGP_NZOHlLtJ_G0019295	Ddx52	66	31.204	MGP_NZOHlLtJ_G0019742	Ddx5	76	31.204
MGP_NZOHlLtJ_G0019295	Ddx52	58	33.144	MGP_NZOHlLtJ_G0031887	Ddx47	83	31.728
MGP_NZOHlLtJ_G0019295	Ddx52	69	34.135	MGP_NZOHlLtJ_G0035581	Ddx43	63	34.135
MGP_NZOHlLtJ_G0019295	Ddx52	68	31.935	MGP_NZOHlLtJ_G0016852	Ddx18	55	32.990
MGP_NZOHlLtJ_G0019295	Ddx52	70	30.222	MGP_NZOHlLtJ_G0022730	Ddx23	54	30.243
MGP_NZOHlLtJ_G0019295	Ddx52	57	43.750	MGP_NZOHlLtJ_G0023106	-	90	30.240
MGP_NZOHlLtJ_G0019295	Ddx52	62	30.750	MGP_NZOHlLtJ_G0030570	Ddx55	61	30.750
MGP_NZOHlLtJ_G0019295	Ddx52	58	30.900	MGP_NZOHlLtJ_G0030361	Ddx51	64	30.900
MGP_NZOHlLtJ_G0019295	Ddx52	60	41.071	MGP_NZOHlLtJ_G0020035	Ddx1	55	41.071
MGP_NZOHlLtJ_G0019295	Ddx52	66	33.824	MGP_NZOHlLtJ_G0021360	Ddx4	57	34.314
MGP_NZOHlLtJ_G0019295	Ddx52	61	30.081	MGP_NZOHlLtJ_G0034213	Ddx49	76	30.081
MGP_NZOHlLtJ_G0019295	Ddx52	66	32.530	MGP_NZOHlLtJ_G0017358	D1Pas1	61	32.530
MGP_NZOHlLtJ_G0019295	Ddx52	70	32.045	MGP_NZOHlLtJ_G0036083	Ddx3x	61	32.530