EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0019327 (Gene tree)
Gene ID: -
Gene Symbol: Dhx40
Alias: 2410016C14Rik|ARG147|DDX40|PAD
Full Name: DEAH (Asp-Glu-Ala-His) box polypeptide 40
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 39212 bases
Position: chr11:87736907-87776118
Accession: 1914737
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0031944	DEAD	PF00270.29	7.1e-09	1	1
MGP_NZOHlLtJ_P0031945	HA2	PF04408.23	3e-15	1	1
MGP_NZOHlLtJ_P0031944	HA2	PF04408.23	6.9e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0031947	-	626	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0031946	-	646	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0031945	-	912	-	MGP_NZOHlLtJ_P0031945	304 (aa)	-	-
MGP_NZOHlLtJ_T0031944	-	3797	-	MGP_NZOHlLtJ_P0031944	779 (aa)	-	Q6PE54

Gene Model

Click here to download MGP_NZOHlLtJ_G0019327's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0019327's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0019327	Dhx40	99	37.004	MGP_NZOHlLtJ_G0024103	Dhx16	61	42.012
MGP_NZOHlLtJ_G0019327	Dhx40	97	40.088	MGP_NZOHlLtJ_G0019640	Dhx8	53	43.645
MGP_NZOHlLtJ_G0019327	Dhx40	99	34.728	MGP_NZOHlLtJ_G0030007	Dhx15	79	43.103
MGP_NZOHlLtJ_G0019327	Dhx40	80	36.269	MGP_NZOHlLtJ_G0024508	Dhx57	50	36.269
MGP_NZOHlLtJ_G0019327	Dhx40	84	40.429	MGP_NZOHlLtJ_G0034618	Dhx38	54	38.549
MGP_NZOHlLtJ_G0019327	Dhx40	99	32.766	MGP_NZOHlLtJ_G0019054	Dhx33	89	37.348
MGP_NZOHlLtJ_G0019327	Dhx40	83	42.041	MGP_NZOHlLtJ_G0030582	Dhx37	64	42.041
MGP_NZOHlLtJ_G0019327	Dhx40	58	31.417	MGP_NZOHlLtJ_G0020561	Tdrd9	89	31.417
MGP_NZOHlLtJ_G0019327	Dhx40	90	35.262	MGP_NZOHlLtJ_G0027281	Dhx35	99	35.262