EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0019357 (Gene tree)
Gene ID: -
Gene Symbol: Msi2
Alias: 1700105C15Rik|AI451722|AI563628|AW489193|Msi2h|Musashi2|msi2h
Full Name: musashi RNA-binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 391415 bases
Position: chr11:89406521-89797935
Accession: 1923876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0032060	RRM_1	PF00076.22	6.3e-34	1	2
MGP_NZOHlLtJ_P0032060	RRM_1	PF00076.22	6.3e-34	2	2
MGP_NZOHlLtJ_P0032061	RRM_1	PF00076.22	6.6e-34	1	2
MGP_NZOHlLtJ_P0032061	RRM_1	PF00076.22	6.6e-34	2	2
MGP_NZOHlLtJ_P0032064	RRM_1	PF00076.22	3.9e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0032064	-	405	-	MGP_NZOHlLtJ_P0032064	113 (aa)	-	-
MGP_NZOHlLtJ_T0032061	-	1857	-	MGP_NZOHlLtJ_P0032061	346 (aa)	-	-
MGP_NZOHlLtJ_T0032060	-	6365	XM_006534432	MGP_NZOHlLtJ_P0032060	328 (aa)	XP_006534495	Q920Q6
MGP_NZOHlLtJ_T0032063	-	2527	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0032062	-	1749	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0019357's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0019357's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0019357	Msi2	100	45.217	MGP_NZOHlLtJ_G0026332	Hnrnpa3	52	45.217
MGP_NZOHlLtJ_G0019357	Msi2	100	53.982	MGP_NZOHlLtJ_G0030244	Hnrnpd	100	72.000
MGP_NZOHlLtJ_G0019357	Msi2	100	54.867	MGP_NZOHlLtJ_G0030246	Hnrnpdl	78	41.634
MGP_NZOHlLtJ_G0019357	Msi2	100	52.212	MGP_NZOHlLtJ_G0018702	Hnrnpab	70	48.039
MGP_NZOHlLtJ_G0019357	Msi2	61	42.857	MGP_NZOHlLtJ_G0036263	Rbmx	88	45.205
MGP_NZOHlLtJ_G0019357	Msi2	61	42.857	MGP_NZOHlLtJ_G0036057	Rbm3	82	43.243
MGP_NZOHlLtJ_G0019357	Msi2	100	35.398	MGP_NZOHlLtJ_G0029591	Tardbp	79	31.818
MGP_NZOHlLtJ_G0019357	Msi2	73	43.529	MGP_NZOHlLtJ_G0017694	-	97	39.806
MGP_NZOHlLtJ_G0019357	Msi2	84	30.208	MGP_NZOHlLtJ_G0029034	Elavl4	78	30.088
MGP_NZOHlLtJ_G0019357	Msi2	61	41.429	MGP_NZOHlLtJ_G0017921	Cirbp	88	43.243
MGP_NZOHlLtJ_G0019357	Msi2	99	42.400	MGP_NZOHlLtJ_G0017927	Dazap1	98	42.857
MGP_NZOHlLtJ_G0019357	Msi2	60	33.824	MGP_NZOHlLtJ_G0020409	Slirp	70	33.824
MGP_NZOHlLtJ_G0019357	Msi2	100	44.348	MGP_NZOHlLtJ_G0031200	Hnrnpa2b1	56	44.348
MGP_NZOHlLtJ_G0019357	Msi2	50	33.333	MGP_NZOHlLtJ_G0016473	Boll	65	32.857
MGP_NZOHlLtJ_G0019357	Msi2	100	90.323	MGP_NZOHlLtJ_G0030440	Msi1	99	75.665
MGP_NZOHlLtJ_G0019357	Msi2	99	41.228	MGP_NZOHlLtJ_G0021054	Hnrnpa0	59	41.989
MGP_NZOHlLtJ_G0019357	Msi2	73	37.349	MGP_NZOHlLtJ_G0027432	Rbm38	70	38.095
MGP_NZOHlLtJ_G0019357	Msi2	70	31.250	MGP_NZOHlLtJ_G0028903	Elavl2	72	32.632