EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0019742 (Gene tree)
Gene ID: -
Gene Symbol: Ddx5
Alias: 2600009A06Rik|G17P1|HUMP68|Hlr1|p68
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 5
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 10306 bases
Position: chr11:109073737-109084042
Accession: 105037
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0033584	P68HR	PF08061.11	2.1e-07	1	1
MGP_NZOHlLtJ_P0033584	DEAD	PF00270.29	2.3e-47	1	1
MGP_NZOHlLtJ_P0033591	DEAD	PF00270.29	1.5e-15	1	1
MGP_NZOHlLtJ_P0033592	DEAD	PF00270.29	1.1e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0033589	-	710	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0033588	-	496	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0033585	-	3185	-	MGP_NZOHlLtJ_P0033585	406 (aa)	-	-
MGP_NZOHlLtJ_T0033584	-	3139	XM_006532135	MGP_NZOHlLtJ_P0033584	519 (aa)	XP_006532198	B1ARB9
MGP_NZOHlLtJ_T0033587	-	714	-	MGP_NZOHlLtJ_P0033587	71 (aa)	-	-
MGP_NZOHlLtJ_T0033586	-	570	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0033592	-	831	-	MGP_NZOHlLtJ_P0033592	167 (aa)	-	-
MGP_NZOHlLtJ_T0033590	-	812	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0033591	-	863	-	MGP_NZOHlLtJ_P0033591	182 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0019742's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0019742's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0019742	Ddx5	86	32.857	MGP_NZOHlLtJ_G0016981	Ddx59	66	33.094
MGP_NZOHlLtJ_G0019742	Ddx5	73	31.148	MGP_NZOHlLtJ_G0035046	Ddx25	73	32.425
MGP_NZOHlLtJ_G0019742	Ddx5	76	31.204	MGP_NZOHlLtJ_G0019295	Ddx52	66	31.204
MGP_NZOHlLtJ_G0019742	Ddx5	81	42.105	MGP_NZOHlLtJ_G0017358	D1Pas1	61	43.032
MGP_NZOHlLtJ_G0019742	Ddx5	78	32.110	MGP_NZOHlLtJ_G0023106	-	92	33.714
MGP_NZOHlLtJ_G0019742	Ddx5	65	30.029	MGP_NZOHlLtJ_G0024083	Ddx39b	77	30.029
MGP_NZOHlLtJ_G0019742	Ddx5	72	30.070	MGP_NZOHlLtJ_G0026009	Ddx31	56	31.313
MGP_NZOHlLtJ_G0019742	Ddx5	81	38.235	MGP_NZOHlLtJ_G0021029	Ddx41	64	39.163
MGP_NZOHlLtJ_G0019742	Ddx5	78	31.498	MGP_NZOHlLtJ_G0018979	Eif4a1	76	32.804
MGP_NZOHlLtJ_G0019742	Ddx5	89	45.040	MGP_NZOHlLtJ_G0035581	Ddx43	68	44.519
MGP_NZOHlLtJ_G0019742	Ddx5	70	33.446	MGP_NZOHlLtJ_G0017737	Ddx50	51	34.302
MGP_NZOHlLtJ_G0019742	Ddx5	72	33.110	MGP_NZOHlLtJ_G0019909	Eif4a3	82	34.857
MGP_NZOHlLtJ_G0019742	Ddx5	93	83.598	MGP_NZOHlLtJ_G0022501	Ddx17	72	82.415
MGP_NZOHlLtJ_G0019742	Ddx5	81	36.389	MGP_NZOHlLtJ_G0022730	Ddx23	50	37.915
MGP_NZOHlLtJ_G0019742	Ddx5	76	34.062	MGP_NZOHlLtJ_G0034213	Ddx49	97	35.211
MGP_NZOHlLtJ_G0019742	Ddx5	80	38.922	MGP_NZOHlLtJ_G0021360	Ddx4	57	39.012
MGP_NZOHlLtJ_G0019742	Ddx5	74	31.699	MGP_NZOHlLtJ_G0016852	Ddx18	50	33.134
MGP_NZOHlLtJ_G0019742	Ddx5	68	32.042	MGP_NZOHlLtJ_G0031638	Gm5580	78	32.042
MGP_NZOHlLtJ_G0019742	Ddx5	90	41.474	MGP_NZOHlLtJ_G0019727	Ddx42	50	40.871
MGP_NZOHlLtJ_G0019742	Ddx5	71	37.457	MGP_NZOHlLtJ_G0031887	Ddx47	80	37.389
MGP_NZOHlLtJ_G0019742	Ddx5	80	42.522	MGP_NZOHlLtJ_G0036083	Ddx3x	61	43.276
MGP_NZOHlLtJ_G0019742	Ddx5	66	30.137	MGP_NZOHlLtJ_G0030570	Ddx55	57	30.137