EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NZOHlLtJ_G0019879 (Gene tree)
Gene ID
-
Gene Symbol
Tnrc6c
Alias
9930033H14Rik|mKIAA1582
Full Name
trinucleotide repeat containing 6C
Gene Type
protein_coding
Species
Mus_musculus_nzohlltj
Status
putative
Strand
Plus strand
Length
115646 bases
Position
chr11:120714350-120829995
Accession
2443265
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NZOHlLtJ_P0034273Ago_hookPF10427.98.6e-2411
MGP_NZOHlLtJ_P0034275Ago_hookPF10427.98.6e-2411
MGP_NZOHlLtJ_P0034277Ago_hookPF10427.99.6e-2411
MGP_NZOHlLtJ_P0034277RRM_1PF00076.220.0004211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NZOHlLtJ_T0034276-8449-MGP_NZOHlLtJ_P00342761961 (aa)--
MGP_NZOHlLtJ_T0034277-6609-MGP_NZOHlLtJ_P00342771732 (aa)--
MGP_NZOHlLtJ_T0034274-11572--- (aa)--
MGP_NZOHlLtJ_T0034275-8828-MGP_NZOHlLtJ_P00342751900 (aa)--
MGP_NZOHlLtJ_T0034273-8705XM_006533109MGP_NZOHlLtJ_P00342731900 (aa)XP_006533172B1ATC3
MGP_NZOHlLtJ_T0034278-742--- (aa)--
MGP_NZOHlLtJ_T0034279-1829--- (aa)--
Gene Model
Click here to download MGP_NZOHlLtJ_G0019879's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0019879's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NZOHlLtJ_G0019879Tnrc6c9940.645MGP_NZOHlLtJ_G0033473Tnrc6a9844.685
MGP_NZOHlLtJ_G0019879Tnrc6c9936.215MGP_NZOHlLtJ_G0022527Tnrc6b9637.419

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