EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NZOHlLtJ_G0019901 (Gene tree)
Gene ID
-
Gene Symbol
Rbfox3
Alias
D11Bwg0517e|Fox-3|Hrnbp3|NeuN|Neuna60
Full Name
RNA binding protein%2C fox-1 homolog (C. elegans) 3
Gene Type
protein_coding
Species
Mus_musculus_nzohlltj
Status
putative
Strand
Minus strand
Length
430349 bases
Position
chr11:121598875-122029223
Accession
106368
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NZOHlLtJ_P0034373Fox-1_CPF12414.82.3e-4511
MGP_NZOHlLtJ_P0034376Fox-1_CPF12414.82.3e-4511
MGP_NZOHlLtJ_P0034377Fox-1_CPF12414.82.3e-4511
MGP_NZOHlLtJ_P0034375Fox-1_CPF12414.82.5e-4111
MGP_NZOHlLtJ_P0034374Fox-1_CPF12414.82.6e-4111
MGP_NZOHlLtJ_P0034372Fox-1_CPF12414.83e-4111
MGP_NZOHlLtJ_P0034378Fox-1_CPF12414.81.7e-2111
MGP_NZOHlLtJ_P0034379RRM_1PF00076.223.2e-1911
MGP_NZOHlLtJ_P0034373RRM_1PF00076.221.5e-1811
MGP_NZOHlLtJ_P0034376RRM_1PF00076.221.5e-1811
MGP_NZOHlLtJ_P0034377RRM_1PF00076.221.7e-1811
MGP_NZOHlLtJ_P0034372RRM_1PF00076.222e-1811
MGP_NZOHlLtJ_P0034374RRM_1PF00076.222.1e-1811
MGP_NZOHlLtJ_P0034378RRM_1PF00076.221.9e-1411
MGP_NZOHlLtJ_P0034375RRM_1PF00076.220.0003111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NZOHlLtJ_T0034380-301--- (aa)--
MGP_NZOHlLtJ_T0034381-369--- (aa)--
MGP_NZOHlLtJ_T0034379-900-MGP_NZOHlLtJ_P0034379169 (aa)--
MGP_NZOHlLtJ_T0034378-710-MGP_NZOHlLtJ_P0034378145 (aa)--
MGP_NZOHlLtJ_T0034377-2150-MGP_NZOHlLtJ_P0034377327 (aa)--
MGP_NZOHlLtJ_T0034376-1542-MGP_NZOHlLtJ_P0034376313 (aa)--
MGP_NZOHlLtJ_T0034375-1553-MGP_NZOHlLtJ_P0034375329 (aa)--
MGP_NZOHlLtJ_T0034374-3134-MGP_NZOHlLtJ_P0034374374 (aa)--
MGP_NZOHlLtJ_T0034373-2810-MGP_NZOHlLtJ_P0034373313 (aa)--
MGP_NZOHlLtJ_T0034372-3085XM_006533722MGP_NZOHlLtJ_P0034372360 (aa)XP_006533785Q8BIF2
Gene Model
Click here to download MGP_NZOHlLtJ_G0019901's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0019901's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NZOHlLtJ_G0019901Rbfox35331.868MGP_NZOHlLtJ_G0033595Tial18131.111
MGP_NZOHlLtJ_G0019901Rbfox310071.930MGP_NZOHlLtJ_G0022918Rbfox19165.123
MGP_NZOHlLtJ_G0019901Rbfox39961.932MGP_NZOHlLtJ_G0022448Rbfox29161.972
MGP_NZOHlLtJ_G0019901Rbfox37231.429MGP_NZOHlLtJ_G0016473Boll5043.939

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