EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0020319 (Gene tree)
Gene ID: -
Gene Symbol: Srsf5
Alias: Hrs|Sfrs5
Full Name: serine/arginine-rich splicing factor 5
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 13009 bases
Position: chr12:80061835-80074843
Accession: 98287
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0035708	RRM_1	PF00076.22	1.7e-30	1	2
MGP_NZOHlLtJ_P0035708	RRM_1	PF00076.22	1.7e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0035703	-	2708	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0035702	-	2928	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0035705	-	886	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0035704	-	538	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0035707	-	490	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0035706	-	547	-	MGP_NZOHlLtJ_P0035706	46 (aa)	-	-
MGP_NZOHlLtJ_T0035709	-	3471	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0035708	-	1556	-	MGP_NZOHlLtJ_P0035708	266 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0020319's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0020319's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0020319	Srsf5	89	63.415	MGP_NZOHlLtJ_G0027292	Srsf6	50	71.642
MGP_NZOHlLtJ_G0020319	Srsf5	96	51.020	MGP_NZOHlLtJ_G0019352	Srsf1	80	46.988
MGP_NZOHlLtJ_G0020319	Srsf5	89	48.780	MGP_NZOHlLtJ_G0030436	Srsf9	68	39.394