EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0020409 (Gene tree)
Gene ID: -
Gene Symbol: Slirp
Alias: 1810035L17Rik
Full Name: SRA stem-loop interacting RNA binding protein
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 6010 bases
Position: chr12:86931787-86937796
Accession: 1916394
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0036032	RRM_1	PF00076.22	4.1e-14	1	1
MGP_NZOHlLtJ_P0036031	RRM_1	PF00076.22	8.9e-14	1	1
MGP_NZOHlLtJ_P0036033	RRM_1	PF00076.22	8.7e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0036032	-	385	-	MGP_NZOHlLtJ_P0036032	112 (aa)	-	-
MGP_NZOHlLtJ_T0036033	-	335	-	MGP_NZOHlLtJ_P0036033	102 (aa)	-	-
MGP_NZOHlLtJ_T0036031	-	802	-	MGP_NZOHlLtJ_P0036031	99 (aa)	-	Q9D8T7

Gene Model

Click here to download MGP_NZOHlLtJ_G0020409's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0020409's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0020409	Slirp	78	33.846	MGP_NZOHlLtJ_G0017927	Dazap1	89	33.846
MGP_NZOHlLtJ_G0020409	Slirp	70	33.333	MGP_NZOHlLtJ_G0030244	Hnrnpd	71	33.333
MGP_NZOHlLtJ_G0020409	Slirp	70	33.824	MGP_NZOHlLtJ_G0019357	Msi2	60	33.824
MGP_NZOHlLtJ_G0020409	Slirp	73	33.846	MGP_NZOHlLtJ_G0018702	Hnrnpab	51	33.846