EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0020561 (Gene tree)
Gene ID: -
Gene Symbol: Tdrd9
Alias: 4930441E05Rik
Full Name: tudor domain containing 9
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 93901 bases
Position: chr12:112678843-112772743
Accession: 1921941
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0036502	TUDOR	PF00567.24	6.9e-15	1	1
MGP_NZOHlLtJ_P0036502	DEAD	PF00270.29	1.3e-07	1	1
MGP_NZOHlLtJ_P0036502	HA2	PF04408.23	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0036508	-	3681	-	MGP_NZOHlLtJ_P0036508	216 (aa)	-	-
MGP_NZOHlLtJ_T0036509	-	3366	-	MGP_NZOHlLtJ_P0036509	539 (aa)	-	-
MGP_NZOHlLtJ_T0036502	-	4813	XM_006516316	MGP_NZOHlLtJ_P0036502	1383 (aa)	XP_006516379	Q14BI7
MGP_NZOHlLtJ_T0036511	-	456	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0036510	-	796	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0036512	-	486	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0020561's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0020561	Tdrd9	89	38.806	MGP_NZOHlLtJ_G0024508	Dhx57	52	37.778
MGP_NZOHlLtJ_G0020561	Tdrd9	95	32.448	MGP_NZOHlLtJ_G0019054	Dhx33	77	31.000
MGP_NZOHlLtJ_G0020561	Tdrd9	95	33.843	MGP_NZOHlLtJ_G0035859	Dhx30	51	32.248
MGP_NZOHlLtJ_G0020561	Tdrd9	89	31.417	MGP_NZOHlLtJ_G0019327	Dhx40	58	31.417
MGP_NZOHlLtJ_G0020561	Tdrd9	99	34.079	MGP_NZOHlLtJ_G0027736	Dhx36	57	34.171
MGP_NZOHlLtJ_G0020561	Tdrd9	88	30.081	MGP_NZOHlLtJ_G0030007	Dhx15	71	30.081