EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0020694 (Gene tree)
Gene ID: -
Gene Symbol: Zkscan4
Alias: AI841875|Gm11272|OTTMUSG00000000421
Full Name: zinc finger with KRAB and SCAN domains 4
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 6528 bases
Position: chr13:18455217-18461744
Accession: 3649412
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0036873	zf-C2H2	PF00096.26	7e-41	1	7
MGP_NZOHlLtJ_P0036873	zf-C2H2	PF00096.26	7e-41	2	7
MGP_NZOHlLtJ_P0036873	zf-C2H2	PF00096.26	7e-41	3	7
MGP_NZOHlLtJ_P0036873	zf-C2H2	PF00096.26	7e-41	4	7
MGP_NZOHlLtJ_P0036873	zf-C2H2	PF00096.26	7e-41	5	7
MGP_NZOHlLtJ_P0036873	zf-C2H2	PF00096.26	7e-41	6	7
MGP_NZOHlLtJ_P0036873	zf-C2H2	PF00096.26	7e-41	7	7
MGP_NZOHlLtJ_P0036873	zf-met	PF12874.7	1.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0036873	-	2352	-	MGP_NZOHlLtJ_P0036873	464 (aa)	-	Q5SZT6

Gene Model

Click here to download MGP_NZOHlLtJ_G0020694's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0020694's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0020694	Zkscan4	55	52.500	MGP_NZOHlLtJ_G0018688	Zfp454	68	48.485
MGP_NZOHlLtJ_G0020694	Zkscan4	53	42.544	MGP_NZOHlLtJ_G0032405	Zfp974	80	44.304
MGP_NZOHlLtJ_G0020694	Zkscan4	55	45.133	MGP_NZOHlLtJ_G0032611	Zfp715	71	45.133
MGP_NZOHlLtJ_G0020694	Zkscan4	69	53.289	MGP_NZOHlLtJ_G0023677	Zfp51	99	53.289
MGP_NZOHlLtJ_G0020694	Zkscan4	72	45.455	MGP_NZOHlLtJ_G0023675	Zfp677	89	45.455
MGP_NZOHlLtJ_G0020694	Zkscan4	66	55.435	MGP_NZOHlLtJ_G0026939	Zfp661	76	44.622
MGP_NZOHlLtJ_G0020694	Zkscan4	55	47.032	MGP_NZOHlLtJ_G0034279	Zfp882	85	47.032
MGP_NZOHlLtJ_G0020694	Zkscan4	62	42.857	MGP_NZOHlLtJ_G0021128	Rslcan18	74	45.045
MGP_NZOHlLtJ_G0020694	Zkscan4	56	48.908	MGP_NZOHlLtJ_G0018696	Zfp354a	72	47.577
MGP_NZOHlLtJ_G0020694	Zkscan4	55	50.209	MGP_NZOHlLtJ_G0032591	-	63	50.209
MGP_NZOHlLtJ_G0020694	Zkscan4	52	53.226	MGP_NZOHlLtJ_G0031645	Zfp637	71	48.372
MGP_NZOHlLtJ_G0020694	Zkscan4	62	48.171	MGP_NZOHlLtJ_G0023687	Zfp947	84	50.000
MGP_NZOHlLtJ_G0020694	Zkscan4	56	47.826	MGP_NZOHlLtJ_G0031296	Prdm5	77	47.826
MGP_NZOHlLtJ_G0020694	Zkscan4	71	48.035	MGP_NZOHlLtJ_G0021145	Zfp748	93	48.035
MGP_NZOHlLtJ_G0020694	Zkscan4	51	41.518	MGP_NZOHlLtJ_G0029511	Zbtb17	56	41.518
MGP_NZOHlLtJ_G0020694	Zkscan4	51	46.296	MGP_NZOHlLtJ_G0032049	Zfp865	78	36.000
MGP_NZOHlLtJ_G0020694	Zkscan4	53	45.860	MGP_NZOHlLtJ_G0032041	Zfp628	63	43.503
MGP_NZOHlLtJ_G0020694	Zkscan4	59	51.695	MGP_NZOHlLtJ_G0022440	Zfp251	73	48.498
MGP_NZOHlLtJ_G0020694	Zkscan4	55	48.408	MGP_NZOHlLtJ_G0023698	Zfp945	80	46.330
MGP_NZOHlLtJ_G0020694	Zkscan4	55	37.561	MGP_NZOHlLtJ_G0027410	Zfp64	70	37.561
MGP_NZOHlLtJ_G0020694	Zkscan4	55	45.000	MGP_NZOHlLtJ_G0018832	Zfp867	77	45.217
MGP_NZOHlLtJ_G0020694	Zkscan4	58	53.977	MGP_NZOHlLtJ_G0032299	Zfp111	73	53.977
MGP_NZOHlLtJ_G0020694	Zkscan4	67	47.845	MGP_NZOHlLtJ_G0032296	Zfp112	56	47.845
MGP_NZOHlLtJ_G0020694	Zkscan4	51	52.414	MGP_NZOHlLtJ_G0027372	Zfp334	65	52.414
MGP_NZOHlLtJ_G0020694	Zkscan4	95	40.667	MGP_NZOHlLtJ_G0023705	Zscan10	98	43.564
MGP_NZOHlLtJ_G0020694	Zkscan4	73	53.712	MGP_NZOHlLtJ_G0032468	Zfp420	99	60.645
MGP_NZOHlLtJ_G0020694	Zkscan4	56	43.363	MGP_NZOHlLtJ_G0033548	E430018J23Rik	61	41.778
MGP_NZOHlLtJ_G0020694	Zkscan4	53	49.057	MGP_NZOHlLtJ_G0033545	Zfp768	52	52.632
MGP_NZOHlLtJ_G0020694	Zkscan4	55	53.333	MGP_NZOHlLtJ_G0033547	-	61	53.333
MGP_NZOHlLtJ_G0020694	Zkscan4	81	54.032	MGP_NZOHlLtJ_G0032301	Zfp108	75	52.000
MGP_NZOHlLtJ_G0020694	Zkscan4	62	46.591	MGP_NZOHlLtJ_G0032303	Zfp94	72	47.137
MGP_NZOHlLtJ_G0020694	Zkscan4	56	49.286	MGP_NZOHlLtJ_G0032302	Zfp61	58	49.286
MGP_NZOHlLtJ_G0020694	Zkscan4	51	47.934	MGP_NZOHlLtJ_G0030308	Gfi1	99	47.934
MGP_NZOHlLtJ_G0020694	Zkscan4	87	49.091	MGP_NZOHlLtJ_G0021129	Zfp759	88	49.091
MGP_NZOHlLtJ_G0020694	Zkscan4	53	45.342	MGP_NZOHlLtJ_G0029971	Zbtb49	66	47.222
MGP_NZOHlLtJ_G0020694	Zkscan4	55	47.257	MGP_NZOHlLtJ_G0023686	Zfp820	84	47.059
MGP_NZOHlLtJ_G0020694	Zkscan4	55	55.090	MGP_NZOHlLtJ_G0034655	Zfp1	67	55.090
MGP_NZOHlLtJ_G0020694	Zkscan4	55	45.852	MGP_NZOHlLtJ_G0018784	Zfp672	100	41.975
MGP_NZOHlLtJ_G0020694	Zkscan4	55	35.882	MGP_NZOHlLtJ_G0034497	Zfp319	87	35.632
MGP_NZOHlLtJ_G0020694	Zkscan4	58	47.857	MGP_NZOHlLtJ_G0031165	Repin1	95	47.857
MGP_NZOHlLtJ_G0020694	Zkscan4	55	52.381	MGP_NZOHlLtJ_G0032333	Zfp574	59	49.057
MGP_NZOHlLtJ_G0020694	Zkscan4	59	45.701	MGP_NZOHlLtJ_G0034991	Zfp872	87	45.701