EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0021060 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpk
Alias: Hnrpk|Hnrpk {ECO:0000313|EMBL:AAH89328.1,GN ECO:0000313|MGI:MGI:99894}|KBBP|NOVA|hnRNPK
Full Name: heterogeneous nuclear ribonucleoprotein K
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 12771 bases
Position: chr13:57143890-57156660
Accession: 99894
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0037749	KH_1	PF00013.29	2.4e-43	1	3
MGP_NZOHlLtJ_P0037749	KH_1	PF00013.29	2.4e-43	2	3
MGP_NZOHlLtJ_P0037749	KH_1	PF00013.29	2.4e-43	3	3
MGP_NZOHlLtJ_P0037746	KH_1	PF00013.29	2.7e-43	1	3
MGP_NZOHlLtJ_P0037746	KH_1	PF00013.29	2.7e-43	2	3
MGP_NZOHlLtJ_P0037746	KH_1	PF00013.29	2.7e-43	3	3
MGP_NZOHlLtJ_P0037748	KH_1	PF00013.29	2.7e-43	1	3
MGP_NZOHlLtJ_P0037748	KH_1	PF00013.29	2.7e-43	2	3
MGP_NZOHlLtJ_P0037748	KH_1	PF00013.29	2.7e-43	3	3
MGP_NZOHlLtJ_P0037747	KH_1	PF00013.29	2.1e-33	1	2
MGP_NZOHlLtJ_P0037747	KH_1	PF00013.29	2.1e-33	2	2
MGP_NZOHlLtJ_P0037753	KH_1	PF00013.29	1.1e-23	1	2
MGP_NZOHlLtJ_P0037753	KH_1	PF00013.29	1.1e-23	2	2
MGP_NZOHlLtJ_P0037750	KH_1	PF00013.29	1.6e-23	1	2
MGP_NZOHlLtJ_P0037750	KH_1	PF00013.29	1.6e-23	2	2
MGP_NZOHlLtJ_P0037756	KH_1	PF00013.29	2.9e-23	1	2
MGP_NZOHlLtJ_P0037756	KH_1	PF00013.29	2.9e-23	2	2
MGP_NZOHlLtJ_P0037758	KH_1	PF00013.29	3.3e-09	1	1
MGP_NZOHlLtJ_P0037760	KH_1	PF00013.29	6.6e-09	1	1
MGP_NZOHlLtJ_P0037755	KH_1	PF00013.29	3.5e-05	1	1
MGP_NZOHlLtJ_P0037760	KH_2	PF07650.17	0.00011	1	1
MGP_NZOHlLtJ_P0037755	KH_2	PF07650.17	0.00024	1	1
MGP_NZOHlLtJ_P0037755	ROKNT	PF08067.11	2e-27	1	1
MGP_NZOHlLtJ_P0037750	ROKNT	PF08067.11	3.1e-27	1	1
MGP_NZOHlLtJ_P0037760	ROKNT	PF08067.11	3.6e-27	1	1
MGP_NZOHlLtJ_P0037749	ROKNT	PF08067.11	7.8e-27	1	1
MGP_NZOHlLtJ_P0037753	ROKNT	PF08067.11	1.9e-26	1	1
MGP_NZOHlLtJ_P0037746	ROKNT	PF08067.11	3.9e-26	1	1
MGP_NZOHlLtJ_P0037748	ROKNT	PF08067.11	3.9e-26	1	1
MGP_NZOHlLtJ_P0037756	ROKNT	PF08067.11	1.9e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0037761	-	780	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0037760	-	1053	-	MGP_NZOHlLtJ_P0037760	97 (aa)	-	-
MGP_NZOHlLtJ_T0037759	-	775	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0037748	-	2324	-	MGP_NZOHlLtJ_P0037748	453 (aa)	-	-
MGP_NZOHlLtJ_T0037758	-	476	-	MGP_NZOHlLtJ_P0037758	87 (aa)	-	-
MGP_NZOHlLtJ_T0037750	-	1004	-	MGP_NZOHlLtJ_P0037750	299 (aa)	-	-
MGP_NZOHlLtJ_T0037749	-	1588	-	MGP_NZOHlLtJ_P0037749	440 (aa)	-	-
MGP_NZOHlLtJ_T0037751	-	522	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0037747	-	2233	-	MGP_NZOHlLtJ_P0037747	384 (aa)	-	-
MGP_NZOHlLtJ_T0037746	-	2558	XM_006517103	MGP_NZOHlLtJ_P0037746	453 (aa)	XP_006517166	P61979
MGP_NZOHlLtJ_T0037752	-	737	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0037753	-	900	-	MGP_NZOHlLtJ_P0037753	256 (aa)	-	-
MGP_NZOHlLtJ_T0037754	-	459	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0037755	-	723	-	MGP_NZOHlLtJ_P0037755	77 (aa)	-	-
MGP_NZOHlLtJ_T0037756	-	676	-	MGP_NZOHlLtJ_P0037756	178 (aa)	-	-
MGP_NZOHlLtJ_T0037757	-	833	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0021060	Hnrnpk	77	50.649	MGP_NZOHlLtJ_G0017824	Pcbp3	79	41.667
MGP_NZOHlLtJ_G0021060	Hnrnpk	78	31.724	MGP_NZOHlLtJ_G0031441	Pcbp1	85	42.857
MGP_NZOHlLtJ_G0021060	Hnrnpk	58	39.062	MGP_NZOHlLtJ_G0020143	Nova1	56	39.062
MGP_NZOHlLtJ_G0021060	Hnrnpk	57	38.462	MGP_NZOHlLtJ_G0032224	Nova2	54	37.681
MGP_NZOHlLtJ_G0021060	Hnrnpk	66	44.000	MGP_NZOHlLtJ_G0022842	Pcbp2	84	44.444
MGP_NZOHlLtJ_G0021060	Hnrnpk	78	32.414	MGP_NZOHlLtJ_G0035746	-	86	33.728
MGP_NZOHlLtJ_G0021060	Hnrnpk	57	34.615	MGP_NZOHlLtJ_G0028461	Fubp1	53	34.615
MGP_NZOHlLtJ_G0021060	Hnrnpk	94	98.611	MGP_NZOHlLtJ_G0032953	-	55	99.163