EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0021101 (Gene tree)
Gene ID: -
Gene Symbol: Ercc6l2
Alias: 0610007P08Rik|1700019D06Rik|9330134C04Rik|Rad26l|Sr278
Full Name: excision repair cross-complementing rodent repair deficiency%2C complementation group 6 like 2
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 89831 bases
Position: chr13:62847632-62937462
Accession: 1923501
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0037880	ResIII	PF04851.15	1.5e-11	1	1
MGP_NZOHlLtJ_P0037883	ResIII	PF04851.15	1.9e-11	1	1
MGP_NZOHlLtJ_P0037881	ResIII	PF04851.15	2e-11	1	1
MGP_NZOHlLtJ_P0037878	ResIII	PF04851.15	1.1e-10	1	1
MGP_NZOHlLtJ_P0037884	ResIII	PF04851.15	1.3e-10	1	1
MGP_NZOHlLtJ_P0037877	ResIII	PF04851.15	8.4e-10	1	1
MGP_NZOHlLtJ_P0037880	DEAD	PF00270.29	3.6e-07	1	1
MGP_NZOHlLtJ_P0037884	DEAD	PF00270.29	4.1e-07	1	1
MGP_NZOHlLtJ_P0037883	DEAD	PF00270.29	5.2e-07	1	1
MGP_NZOHlLtJ_P0037881	DEAD	PF00270.29	5.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0037884	-	1726	-	MGP_NZOHlLtJ_P0037884	574 (aa)	-	-
MGP_NZOHlLtJ_T0037885	-	759	-	MGP_NZOHlLtJ_P0037885	152 (aa)	-	-
MGP_NZOHlLtJ_T0037879	-	1820	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0037878	-	3436	-	MGP_NZOHlLtJ_P0037878	842 (aa)	-	-
MGP_NZOHlLtJ_T0037886	-	987	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0037887	-	2573	-	MGP_NZOHlLtJ_P0037887	592 (aa)	-	-
MGP_NZOHlLtJ_T0037880	-	1888	-	MGP_NZOHlLtJ_P0037880	582 (aa)	-	-
MGP_NZOHlLtJ_T0037881	-	2692	-	MGP_NZOHlLtJ_P0037881	699 (aa)	-	-
MGP_NZOHlLtJ_T0037882	-	1961	-	MGP_NZOHlLtJ_P0037882	191 (aa)	-	-
MGP_NZOHlLtJ_T0037883	-	2529	-	MGP_NZOHlLtJ_P0037883	684 (aa)	-	-
MGP_NZOHlLtJ_T0037877	-	1592	-	MGP_NZOHlLtJ_P0037877	467 (aa)	-	Q9JIM3

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0021101	Ercc6l2	81	30.021	MGP_NZOHlLtJ_G0028113	Chd1l	50	32.657
MGP_NZOHlLtJ_G0021101	Ercc6l2	82	30.353	MGP_NZOHlLtJ_G0036200	Smarca1	71	30.490