EuRBPDB

Description

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0042237	APOBEC_N	PF08210.11	8.4e-82	1	2
MGP_NZOHlLtJ_P0042237	APOBEC_N	PF08210.11	8.4e-82	2	2
MGP_NZOHlLtJ_P0042240	APOBEC_N	PF08210.11	9.5e-82	1	2
MGP_NZOHlLtJ_P0042240	APOBEC_N	PF08210.11	9.5e-82	2	2
MGP_NZOHlLtJ_P0042236	APOBEC_N	PF08210.11	1.2e-81	1	2
MGP_NZOHlLtJ_P0042236	APOBEC_N	PF08210.11	1.2e-81	2	2
MGP_NZOHlLtJ_P0042241	APOBEC_N	PF08210.11	1.2e-81	1	2
MGP_NZOHlLtJ_P0042241	APOBEC_N	PF08210.11	1.2e-81	2	2
MGP_NZOHlLtJ_P0042235	APOBEC_N	PF08210.11	1.4e-81	1	2
MGP_NZOHlLtJ_P0042235	APOBEC_N	PF08210.11	1.4e-81	2	2
MGP_NZOHlLtJ_P0042243	APOBEC_N	PF08210.11	8.9e-60	1	2
MGP_NZOHlLtJ_P0042243	APOBEC_N	PF08210.11	8.9e-60	2	2
MGP_NZOHlLtJ_P0042233	APOBEC_N	PF08210.11	2.2e-27	1	1
MGP_NZOHlLtJ_P0042232	APOBEC_N	PF08210.11	2.9e-26	1	1
MGP_NZOHlLtJ_P0042244	APOBEC_N	PF08210.11	3.1e-24	1	1
MGP_NZOHlLtJ_P0042243	APOBEC_C	PF05240.14	1e-53	1	2
MGP_NZOHlLtJ_P0042243	APOBEC_C	PF05240.14	1e-53	2	2
MGP_NZOHlLtJ_P0042237	APOBEC_C	PF05240.14	2.2e-53	1	2
MGP_NZOHlLtJ_P0042237	APOBEC_C	PF05240.14	2.2e-53	2	2
MGP_NZOHlLtJ_P0042240	APOBEC_C	PF05240.14	2.5e-53	1	2
MGP_NZOHlLtJ_P0042240	APOBEC_C	PF05240.14	2.5e-53	2	2
MGP_NZOHlLtJ_P0042236	APOBEC_C	PF05240.14	2.9e-53	1	2
MGP_NZOHlLtJ_P0042236	APOBEC_C	PF05240.14	2.9e-53	2	2
MGP_NZOHlLtJ_P0042241	APOBEC_C	PF05240.14	2.9e-53	1	2
MGP_NZOHlLtJ_P0042241	APOBEC_C	PF05240.14	2.9e-53	2	2
MGP_NZOHlLtJ_P0042235	APOBEC_C	PF05240.14	3.1e-53	1	2
MGP_NZOHlLtJ_P0042235	APOBEC_C	PF05240.14	3.1e-53	2	2
MGP_NZOHlLtJ_P0042233	APOBEC_C	PF05240.14	1.2e-27	1	1
MGP_NZOHlLtJ_P0042232	APOBEC_C	PF05240.14	1.5e-27	1	1
MGP_NZOHlLtJ_P0042244	APOBEC_C	PF05240.14	3.7e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0042241	-	2765	-	MGP_NZOHlLtJ_P0042241	430 (aa)	-	-
MGP_NZOHlLtJ_T0042247	-	721	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0042233	-	826	-	MGP_NZOHlLtJ_P0042233	151 (aa)	-	-
MGP_NZOHlLtJ_T0042232	-	759	XM_006521551	MGP_NZOHlLtJ_P0042232	166 (aa)	XP_006521614	Q99J72
MGP_NZOHlLtJ_T0042237	-	2360	-	MGP_NZOHlLtJ_P0042237	396 (aa)	-	-
MGP_NZOHlLtJ_T0042236	-	2459	-	MGP_NZOHlLtJ_P0042236	429 (aa)	-	-
MGP_NZOHlLtJ_T0042235	-	1953	-	MGP_NZOHlLtJ_P0042235	440 (aa)	-	-
MGP_NZOHlLtJ_T0042234	-	600	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0042242	-	2225	-	MGP_NZOHlLtJ_P0042242	392 (aa)	-	-
MGP_NZOHlLtJ_T0042243	-	1842	-	MGP_NZOHlLtJ_P0042243	297 (aa)	-	-
MGP_NZOHlLtJ_T0042239	-	1217	-	MGP_NZOHlLtJ_P0042239	46 (aa)	-	-
MGP_NZOHlLtJ_T0042238	-	699	-	MGP_NZOHlLtJ_P0042238	79 (aa)	-	-
MGP_NZOHlLtJ_T0042246	-	2087	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0042240	-	1977	-	MGP_NZOHlLtJ_P0042240	407 (aa)	-	-
MGP_NZOHlLtJ_T0042244	-	650	-	MGP_NZOHlLtJ_P0042244	85 (aa)	-	-
MGP_NZOHlLtJ_T0042245	-	739	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0022513	Apobec3	98	33.721	MGP_NZOHlLtJ_G0024324	Apobec2	77	33.898
MGP_NZOHlLtJ_G0022513	Apobec3	96	40.964	MGP_NZOHlLtJ_G0031695	Aicda	91	39.344
MGP_NZOHlLtJ_G0022513	Apobec3	96	35.366	MGP_NZOHlLtJ_G0031696	Apobec1	74	35.789