EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0022730 (Gene tree)
Gene ID: -
Gene Symbol: Ddx23
Alias: 3110082M05Rik|4921506D17Rik
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 18217 bases
Position: chr15:99475910-99494126
Accession: 1921601
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0042951	DEAD	PF00270.29	2.4e-53	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0042952	-	3093	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0042953	-	3411	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0042951	-	3186	XM_006521493	MGP_NZOHlLtJ_P0042951	819 (aa)	XP_006521556	D3Z0M9
MGP_NZOHlLtJ_T0042956	-	610	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0042954	-	793	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0042955	-	321	-	MGP_NZOHlLtJ_P0042955	80 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0022730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0022730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0022730	Ddx23	53	38.063	MGP_NZOHlLtJ_G0017358	D1Pas1	63	38.063
MGP_NZOHlLtJ_G0022730	Ddx23	50	37.915	MGP_NZOHlLtJ_G0019742	Ddx5	81	36.389
MGP_NZOHlLtJ_G0022730	Ddx23	50	30.900	MGP_NZOHlLtJ_G0023106	-	92	30.900
MGP_NZOHlLtJ_G0022730	Ddx23	54	30.243	MGP_NZOHlLtJ_G0019295	Ddx52	70	30.222
MGP_NZOHlLtJ_G0022730	Ddx23	52	37.868	MGP_NZOHlLtJ_G0036083	Ddx3x	63	37.753
MGP_NZOHlLtJ_G0022730	Ddx23	51	39.110	MGP_NZOHlLtJ_G0022501	Ddx17	60	39.110
MGP_NZOHlLtJ_G0022730	Ddx23	52	40.139	MGP_NZOHlLtJ_G0021029	Ddx41	75	37.400
MGP_NZOHlLtJ_G0022730	Ddx23	54	40.757	MGP_NZOHlLtJ_G0035581	Ddx43	63	40.757
MGP_NZOHlLtJ_G0022730	Ddx23	52	35.417	MGP_NZOHlLtJ_G0016981	Ddx59	64	35.417