EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0022842 (Gene tree)
Gene ID: -
Gene Symbol: Pcbp2
Alias: AW412548|Cbp|Hnrnpx|Hnrpx|alphaCP-2
Full Name: poly(rC) binding protein 2
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 33488 bases
Position: chr15:103618455-103651942
Accession: 108202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0043259	KH_1	PF00013.29	1.6e-49	1	3
MGP_NZOHlLtJ_P0043259	KH_1	PF00013.29	1.6e-49	2	3
MGP_NZOHlLtJ_P0043259	KH_1	PF00013.29	1.6e-49	3	3
MGP_NZOHlLtJ_P0043261	KH_1	PF00013.29	2e-49	1	3
MGP_NZOHlLtJ_P0043261	KH_1	PF00013.29	2e-49	2	3
MGP_NZOHlLtJ_P0043261	KH_1	PF00013.29	2e-49	3	3
MGP_NZOHlLtJ_P0043260	KH_1	PF00013.29	2.4e-49	1	3
MGP_NZOHlLtJ_P0043260	KH_1	PF00013.29	2.4e-49	2	3
MGP_NZOHlLtJ_P0043260	KH_1	PF00013.29	2.4e-49	3	3
MGP_NZOHlLtJ_P0043259	KH_2	PF07650.17	2e-14	1	1
MGP_NZOHlLtJ_P0043261	KH_2	PF07650.17	2.5e-14	1	1
MGP_NZOHlLtJ_P0043260	KH_2	PF07650.17	3.1e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0043261	-	2808	-	MGP_NZOHlLtJ_P0043261	349 (aa)	-	-
MGP_NZOHlLtJ_T0043260	-	2847	-	MGP_NZOHlLtJ_P0043260	362 (aa)	-	-
MGP_NZOHlLtJ_T0043259	-	2754	XM_006520582	MGP_NZOHlLtJ_P0043259	331 (aa)	XP_006520645	Q61990

Gene Model

Click here to download MGP_NZOHlLtJ_G0022842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0022842's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0022842	Pcbp2	68	33.333	MGP_NZOHlLtJ_G0024398	Khsrp	51	33.333
MGP_NZOHlLtJ_G0022842	Pcbp2	95	35.556	MGP_NZOHlLtJ_G0023094	Igf2bp2	62	35.556
MGP_NZOHlLtJ_G0022842	Pcbp2	68	41.096	MGP_NZOHlLtJ_G0032224	Nova2	50	41.096
MGP_NZOHlLtJ_G0022842	Pcbp2	97	59.877	MGP_NZOHlLtJ_G0035746	-	98	66.321
MGP_NZOHlLtJ_G0022842	Pcbp2	84	44.444	MGP_NZOHlLtJ_G0021060	Hnrnpk	66	44.000
MGP_NZOHlLtJ_G0022842	Pcbp2	69	39.726	MGP_NZOHlLtJ_G0020143	Nova1	53	39.726
MGP_NZOHlLtJ_G0022842	Pcbp2	99	78.338	MGP_NZOHlLtJ_G0017824	Pcbp3	99	82.143
MGP_NZOHlLtJ_G0022842	Pcbp2	100	81.744	MGP_NZOHlLtJ_G0031441	Pcbp1	100	81.744