EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NZOHlLtJ_G0023467 (Gene tree)
Gene ID
-
Gene Symbol
Synj1
Alias
A930006D20Rik|AA675315|mKIAA0910
Full Name
synaptojanin 1
Gene Type
protein_coding
Species
Mus_musculus_nzohlltj
Status
putative
Strand
Minus strand
Length
78197 bases
Position
chr16:90774477-90852673
Accession
1354961
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NZOHlLtJ_P0045561Exo_endo_phosPF03372.231.1e-1411
MGP_NZOHlLtJ_P0045563Exo_endo_phosPF03372.231.1e-1411
MGP_NZOHlLtJ_P0045560Exo_endo_phosPF03372.231.5e-1411
MGP_NZOHlLtJ_P0045568Exo_endo_phosPF03372.232.6e-0711
MGP_NZOHlLtJ_P0045561DUF1866PF08952.111.7e-5711
MGP_NZOHlLtJ_P0045563DUF1866PF08952.111.8e-5711
MGP_NZOHlLtJ_P0045560DUF1866PF08952.112.1e-5711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NZOHlLtJ_T0045562-3493-MGP_NZOHlLtJ_P0045562188 (aa)--
MGP_NZOHlLtJ_T0045563-4771-MGP_NZOHlLtJ_P00455631323 (aa)--
MGP_NZOHlLtJ_T0045560-7083XM_006522837MGP_NZOHlLtJ_P00455601607 (aa)XP_006522900D3Z1M7
MGP_NZOHlLtJ_T0045561-7008-MGP_NZOHlLtJ_P00455611309 (aa)--
MGP_NZOHlLtJ_T0045566-354-MGP_NZOHlLtJ_P0045566117 (aa)--
MGP_NZOHlLtJ_T0045567-2743--- (aa)--
MGP_NZOHlLtJ_T0045564-772--- (aa)--
MGP_NZOHlLtJ_T0045565-547-MGP_NZOHlLtJ_P0045565103 (aa)--
MGP_NZOHlLtJ_T0045568-2189-MGP_NZOHlLtJ_P0045568693 (aa)--
MGP_NZOHlLtJ_T0045569-947--- (aa)--
Gene Model
Click here to download MGP_NZOHlLtJ_G0023467's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0023467's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NZOHlLtJ_G0023467Synj110059.770MGP_NZOHlLtJ_G0023545Synj29959.581

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