EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0024040 (Gene tree)
Gene ID: -
Gene Symbol: Skiv2l
Alias: 4930534J06Rik|AW214248|Ddx13|SKI|Ski2w
Full Name: superkiller viralicidic activity 2-like (S. cerevisiae)
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 11776 bases
Position: chr17:34497395-34509170
Accession: 1099835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0047726	rRNA_proc-arch	PF13234.6	1.3e-41	1	1
MGP_NZOHlLtJ_P0047730	rRNA_proc-arch	PF13234.6	1e-17	1	2
MGP_NZOHlLtJ_P0047730	rRNA_proc-arch	PF13234.6	1e-17	2	2
MGP_NZOHlLtJ_P0047726	DEAD	PF00270.29	1.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0047731	-	817	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0047730	-	727	-	MGP_NZOHlLtJ_P0047730	242 (aa)	-	-
MGP_NZOHlLtJ_T0047733	-	832	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0047732	-	927	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0047726	-	3951	-	MGP_NZOHlLtJ_P0047726	1244 (aa)	-	-
MGP_NZOHlLtJ_T0047727	-	3995	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0047725	-	4119	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0047728	-	4520	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0047729	-	462	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0047735	-	881	-	MGP_NZOHlLtJ_P0047735	92 (aa)	-	-
MGP_NZOHlLtJ_T0047734	-	458	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0024040's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0024040	Skiv2l	76	37.279	MGP_NZOHlLtJ_G0021363	Skiv2l2	88	37.279