EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0024338 (Gene tree)
Gene ID: -
Gene Symbol: Rab5a
Alias: 2410015H04Rik|AI663973|AU021172|nnyRab5a
Full Name: RAB5A%2C member RAS oncogene family
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 28499 bases
Position: chr17:54425178-54453676
Accession: 105926
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0048728	MMR_HSR1	PF01926.23	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0048728	-	1952	-	MGP_NZOHlLtJ_P0048728	215 (aa)	-	Q9CQD1

Gene Model

Click here to download MGP_NZOHlLtJ_G0024338's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0024338's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0024338	Rab5a	95	41.951	MGP_NZOHlLtJ_G0019802	Rab37	93	41.951
MGP_NZOHlLtJ_G0024338	Rab5a	90	42.647	MGP_NZOHlLtJ_G0023982	Rab11b	94	42.647
MGP_NZOHlLtJ_G0024338	Rab5a	91	41.951	MGP_NZOHlLtJ_G0035457	Rab11a	88	48.148
MGP_NZOHlLtJ_G0024338	Rab5a	78	31.737	MGP_NZOHlLtJ_G0032059	Rasl2-9	76	31.737
MGP_NZOHlLtJ_G0024338	Rab5a	74	35.928	MGP_NZOHlLtJ_G0022666	Rabl2	72	35.928
MGP_NZOHlLtJ_G0024338	Rab5a	75	41.615	MGP_NZOHlLtJ_G0028511	Rab2a	97	36.667
MGP_NZOHlLtJ_G0024338	Rab5a	90	46.429	MGP_NZOHlLtJ_G0025154	Rab1b	96	46.429
MGP_NZOHlLtJ_G0024338	Rab5a	73	33.121	MGP_NZOHlLtJ_G0029820	Rheb	85	33.121
MGP_NZOHlLtJ_G0024338	Rab5a	90	37.436	MGP_NZOHlLtJ_G0030446	Rab35	96	37.436
MGP_NZOHlLtJ_G0024338	Rab5a	75	36.585	MGP_NZOHlLtJ_G0036387	Rab39b	77	36.585
MGP_NZOHlLtJ_G0024338	Rab5a	74	40.881	MGP_NZOHlLtJ_G0020291	Rab15	75	40.881
MGP_NZOHlLtJ_G0024338	Rab5a	81	43.678	MGP_NZOHlLtJ_G0033019	Rab30	86	43.678
MGP_NZOHlLtJ_G0024338	Rab5a	90	49.231	MGP_NZOHlLtJ_G0027439	Rab22a	98	49.231
MGP_NZOHlLtJ_G0024338	Rab5a	75	41.566	MGP_NZOHlLtJ_G0036210	Rab33a	70	41.566
MGP_NZOHlLtJ_G0024338	Rab5a	80	31.667	MGP_NZOHlLtJ_G0031955	Kras	94	31.667
MGP_NZOHlLtJ_G0024338	Rab5a	95	41.546	MGP_NZOHlLtJ_G0033079	Rab6a	98	41.546
MGP_NZOHlLtJ_G0024338	Rab5a	76	32.727	MGP_NZOHlLtJ_G0028159	Nras	99	34.667
MGP_NZOHlLtJ_G0024338	Rab5a	81	40.782	MGP_NZOHlLtJ_G0031468	Rab7	97	45.263
MGP_NZOHlLtJ_G0024338	Rab5a	90	35.323	MGP_NZOHlLtJ_G0036637	Rab9b	97	35.323
MGP_NZOHlLtJ_G0024338	Rab5a	90	40.816	MGP_NZOHlLtJ_G0024584	Rab18	93	40.816
MGP_NZOHlLtJ_G0024338	Rab5a	56	33.065	MGP_NZOHlLtJ_G0031568	Arl8b	63	33.065
MGP_NZOHlLtJ_G0024338	Rab5a	91	30.244	MGP_NZOHlLtJ_G0017784	Rab36	77	30.244
MGP_NZOHlLtJ_G0024338	Rab5a	55	30.159	MGP_NZOHlLtJ_G0020130	Arl4a	60	30.159
MGP_NZOHlLtJ_G0024338	Rab5a	91	47.449	MGP_NZOHlLtJ_G0024428	Rab31	98	47.449
MGP_NZOHlLtJ_G0024338	Rab5a	90	34.328	MGP_NZOHlLtJ_G0036792	Rab9	97	34.328
MGP_NZOHlLtJ_G0024338	Rab5a	77	40.351	MGP_NZOHlLtJ_G0027675	Rab33b	75	40.351
MGP_NZOHlLtJ_G0024338	Rab5a	95	42.718	MGP_NZOHlLtJ_G0035708	Rab6b	98	42.718
MGP_NZOHlLtJ_G0024338	Rab5a	100	87.500	MGP_NZOHlLtJ_G0019596	Rab5c	100	87.500
MGP_NZOHlLtJ_G0024338	Rab5a	60	32.576	MGP_NZOHlLtJ_G0016957	Arl8a	66	32.576
MGP_NZOHlLtJ_G0024338	Rab5a	78	41.916	MGP_NZOHlLtJ_G0021721	Rab2b	79	44.079
MGP_NZOHlLtJ_G0024338	Rab5a	73	32.500	MGP_NZOHlLtJ_G0019199	Rab34	62	32.500
MGP_NZOHlLtJ_G0024338	Rab5a	81	37.989	MGP_NZOHlLtJ_G0024437	Rab12	62	37.989
MGP_NZOHlLtJ_G0024338	Rab5a	82	31.667	MGP_NZOHlLtJ_G0033728	Hras	94	31.667
MGP_NZOHlLtJ_G0024338	Rab5a	90	43.814	MGP_NZOHlLtJ_G0018498	Rab1a	95	43.814
MGP_NZOHlLtJ_G0024338	Rab5a	90	40.704	MGP_NZOHlLtJ_G0027878	Rab25	93	40.704
MGP_NZOHlLtJ_G0024338	Rab5a	74	38.125	MGP_NZOHlLtJ_G0016340	Rab23	67	38.125