EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0025063 (Gene tree)
Gene ID: -
Gene Symbol: Zfp236
Alias: AI447957|Gm335|LOC240456
Full Name: zinc finger protein 236
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 110333 bases
Position: chr18:82521567-82631899
Accession: 1926950
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	1	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	2	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	3	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	4	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	5	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	6	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	7	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	8	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	9	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	10	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	11	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	12	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	13	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	14	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	15	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	16	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	17	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	18	19
MGP_NZOHlLtJ_P0050773	zf-C2H2	PF00096.26	1.1e-110	19	19
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	1	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	2	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	3	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	4	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	5	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	6	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	7	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	8	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	9	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	10	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	11	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	12	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	13	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	14	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	15	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	16	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	17	18
MGP_NZOHlLtJ_P0050770	zf-C2H2	PF00096.26	5.9e-108	18	18
MGP_NZOHlLtJ_P0050776	zf-C2H2	PF00096.26	6.9e-06	1	1
MGP_NZOHlLtJ_P0050770	zf-met	PF12874.7	6e-06	1	4
MGP_NZOHlLtJ_P0050770	zf-met	PF12874.7	6e-06	2	4
MGP_NZOHlLtJ_P0050770	zf-met	PF12874.7	6e-06	3	4
MGP_NZOHlLtJ_P0050770	zf-met	PF12874.7	6e-06	4	4
MGP_NZOHlLtJ_P0050773	zf-met	PF12874.7	3.4e-05	1	4
MGP_NZOHlLtJ_P0050773	zf-met	PF12874.7	3.4e-05	2	4
MGP_NZOHlLtJ_P0050773	zf-met	PF12874.7	3.4e-05	3	4
MGP_NZOHlLtJ_P0050773	zf-met	PF12874.7	3.4e-05	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0050775	-	665	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0050774	-	6170	-	MGP_NZOHlLtJ_P0050774	485 (aa)	-	-
MGP_NZOHlLtJ_T0050776	-	410	-	MGP_NZOHlLtJ_P0050776	65 (aa)	-	-
MGP_NZOHlLtJ_T0050771	-	10053	-	MGP_NZOHlLtJ_P0050771	1840 (aa)	-	-
MGP_NZOHlLtJ_T0050770	-	9584	XM_006526490	MGP_NZOHlLtJ_P0050770	1799 (aa)	XP_006526553	B2RR24
MGP_NZOHlLtJ_T0050773	-	6059	-	MGP_NZOHlLtJ_P0050773	1847 (aa)	-	-
MGP_NZOHlLtJ_T0050772	-	3227	-	MGP_NZOHlLtJ_P0050772	42 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0025063's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0025063's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0025063	Zfp236	71	45.902	MGP_NZOHlLtJ_G0018832	Zfp867	94	45.902
MGP_NZOHlLtJ_G0025063	Zfp236	79	36.691	MGP_NZOHlLtJ_G0032405	Zfp974	87	45.652
MGP_NZOHlLtJ_G0025063	Zfp236	68	44.545	MGP_NZOHlLtJ_G0027372	Zfp334	68	44.545
MGP_NZOHlLtJ_G0025063	Zfp236	62	44.318	MGP_NZOHlLtJ_G0034991	Zfp872	94	40.800
MGP_NZOHlLtJ_G0025063	Zfp236	65	50.633	MGP_NZOHlLtJ_G0023687	Zfp947	79	49.505
MGP_NZOHlLtJ_G0025063	Zfp236	73	45.455	MGP_NZOHlLtJ_G0023686	Zfp820	77	45.455
MGP_NZOHlLtJ_G0025063	Zfp236	62	39.024	MGP_NZOHlLtJ_G0031750	Zfp384	69	38.655
MGP_NZOHlLtJ_G0025063	Zfp236	54	46.739	MGP_NZOHlLtJ_G0030308	Gfi1	100	46.739
MGP_NZOHlLtJ_G0025063	Zfp236	81	53.333	MGP_NZOHlLtJ_G0027409	Sall4	73	53.333
MGP_NZOHlLtJ_G0025063	Zfp236	59	41.096	MGP_NZOHlLtJ_G0032041	Zfp628	61	42.500
MGP_NZOHlLtJ_G0025063	Zfp236	62	43.023	MGP_NZOHlLtJ_G0029971	Zbtb49	62	47.887
MGP_NZOHlLtJ_G0025063	Zfp236	75	34.940	MGP_NZOHlLtJ_G0033572	Zfp646	90	34.940
MGP_NZOHlLtJ_G0025063	Zfp236	69	42.647	MGP_NZOHlLtJ_G0032303	Zfp94	76	42.647
MGP_NZOHlLtJ_G0025063	Zfp236	65	45.536	MGP_NZOHlLtJ_G0032301	Zfp108	67	43.119
MGP_NZOHlLtJ_G0025063	Zfp236	78	40.690	MGP_NZOHlLtJ_G0034497	Zfp319	87	40.690
MGP_NZOHlLtJ_G0025063	Zfp236	58	42.177	MGP_NZOHlLtJ_G0033548	E430018J23Rik	58	42.177
MGP_NZOHlLtJ_G0025063	Zfp236	67	40.909	MGP_NZOHlLtJ_G0033547	-	87	45.946
MGP_NZOHlLtJ_G0025063	Zfp236	58	48.780	MGP_NZOHlLtJ_G0033545	Zfp768	53	45.536
MGP_NZOHlLtJ_G0025063	Zfp236	60	45.652	MGP_NZOHlLtJ_G0034655	Zfp1	67	45.652
MGP_NZOHlLtJ_G0025063	Zfp236	80	46.575	MGP_NZOHlLtJ_G0021129	Zfp759	97	37.975
MGP_NZOHlLtJ_G0025063	Zfp236	69	43.902	MGP_NZOHlLtJ_G0032299	Zfp111	77	46.667
MGP_NZOHlLtJ_G0025063	Zfp236	68	39.806	MGP_NZOHlLtJ_G0032296	Zfp112	52	42.742
MGP_NZOHlLtJ_G0025063	Zfp236	66	45.455	MGP_NZOHlLtJ_G0031645	Zfp637	85	51.807
MGP_NZOHlLtJ_G0025063	Zfp236	86	31.818	MGP_NZOHlLtJ_G0017607	Zbtb24	54	45.794
MGP_NZOHlLtJ_G0025063	Zfp236	59	41.748	MGP_NZOHlLtJ_G0019420	Zfp652	58	41.748
MGP_NZOHlLtJ_G0025063	Zfp236	77	43.860	MGP_NZOHlLtJ_G0031296	Prdm5	85	43.878
MGP_NZOHlLtJ_G0025063	Zfp236	74	42.857	MGP_NZOHlLtJ_G0032611	Zfp715	69	41.935
MGP_NZOHlLtJ_G0025063	Zfp236	69	42.222	MGP_NZOHlLtJ_G0023675	Zfp677	78	45.455
MGP_NZOHlLtJ_G0025063	Zfp236	75	45.283	MGP_NZOHlLtJ_G0023677	Zfp51	75	45.283
MGP_NZOHlLtJ_G0025063	Zfp236	81	44.304	MGP_NZOHlLtJ_G0031165	Repin1	86	41.429
MGP_NZOHlLtJ_G0025063	Zfp236	63	42.697	MGP_NZOHlLtJ_G0018688	Zfp454	75	42.697
MGP_NZOHlLtJ_G0025063	Zfp236	71	41.228	MGP_NZOHlLtJ_G0034429	Zfp423	94	41.228
MGP_NZOHlLtJ_G0025063	Zfp236	79	47.059	MGP_NZOHlLtJ_G0032468	Zfp420	99	47.059
MGP_NZOHlLtJ_G0025063	Zfp236	73	37.143	MGP_NZOHlLtJ_G0023705	Zscan10	79	37.143
MGP_NZOHlLtJ_G0025063	Zfp236	70	41.121	MGP_NZOHlLtJ_G0034279	Zfp882	87	45.652
MGP_NZOHlLtJ_G0025063	Zfp236	66	38.824	MGP_NZOHlLtJ_G0016992	Zbtb41	61	38.824
MGP_NZOHlLtJ_G0025063	Zfp236	78	36.471	MGP_NZOHlLtJ_G0018784	Zfp672	96	41.096
MGP_NZOHlLtJ_G0025063	Zfp236	69	42.727	MGP_NZOHlLtJ_G0029511	Zbtb17	61	42.727
MGP_NZOHlLtJ_G0025063	Zfp236	78	41.667	MGP_NZOHlLtJ_G0027410	Zfp64	70	42.500
MGP_NZOHlLtJ_G0025063	Zfp236	66	46.429	MGP_NZOHlLtJ_G0032591	-	56	46.429
MGP_NZOHlLtJ_G0025063	Zfp236	63	42.500	MGP_NZOHlLtJ_G0032333	Zfp574	95	41.304
MGP_NZOHlLtJ_G0025063	Zfp236	80	38.732	MGP_NZOHlLtJ_G0023698	Zfp945	77	45.349
MGP_NZOHlLtJ_G0025063	Zfp236	69	40.559	MGP_NZOHlLtJ_G0022440	Zfp251	79	40.559
MGP_NZOHlLtJ_G0025063	Zfp236	82	39.437	MGP_NZOHlLtJ_G0021145	Zfp748	92	39.437