EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NZOHlLtJ_G0025271 (Gene tree)
Gene ID
-
Gene Symbol
Nxf1
Alias
0610006I08Rik|Mex67|Mvb1|TAP|Tap|Tip associated protein
Full Name
nuclear RNA export factor 1
Gene Type
protein_coding
Species
Mus_musculus_nzohlltj
Status
putative
Strand
Plus strand
Length
15418 bases
Position
chr19:5842181-5857598
Accession
1858330
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NZOHlLtJ_P0051524Tap-RNA_bindPF09162.101.6e-3811
MGP_NZOHlLtJ_P0051525Tap-RNA_bindPF09162.101.8e-3811
MGP_NZOHlLtJ_P0051527Tap-RNA_bindPF09162.101.1e-2211
MGP_NZOHlLtJ_P0051532TAP_CPF03943.137.2e-2611
MGP_NZOHlLtJ_P0051524TAP_CPF03943.131.8e-2411
MGP_NZOHlLtJ_P0051524NTF2PF02136.209.1e-2711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NZOHlLtJ_T0051529-236-MGP_NZOHlLtJ_P005152978 (aa)--
MGP_NZOHlLtJ_T0051528-567-MGP_NZOHlLtJ_P005152875 (aa)--
MGP_NZOHlLtJ_T0051527-1017-MGP_NZOHlLtJ_P0051527282 (aa)--
MGP_NZOHlLtJ_T0051526-590--- (aa)--
MGP_NZOHlLtJ_T0051525-5583-MGP_NZOHlLtJ_P0051525418 (aa)--
MGP_NZOHlLtJ_T0051524-2326-MGP_NZOHlLtJ_P0051524618 (aa)-Q99JX7
MGP_NZOHlLtJ_T0051534-474--- (aa)--
MGP_NZOHlLtJ_T0051535-748-MGP_NZOHlLtJ_P0051535199 (aa)--
MGP_NZOHlLtJ_T0051530-927--- (aa)--
MGP_NZOHlLtJ_T0051531-519--- (aa)--
MGP_NZOHlLtJ_T0051532-505-MGP_NZOHlLtJ_P005153288 (aa)--
MGP_NZOHlLtJ_T0051533-431--- (aa)--
Gene Model
Click here to download MGP_NZOHlLtJ_G0025271's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0025271's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NZOHlLtJ_G0025271Nxf19138.475MGP_NZOHlLtJ_G0036622Nxf39138.475
MGP_NZOHlLtJ_G0025271Nxf19158.750MGP_NZOHlLtJ_G0036604Nxf28254.887
MGP_NZOHlLtJ_G0025271Nxf19356.098MGP_NZOHlLtJ_G0036611Nxf79947.929

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us