EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0025477 (Gene tree)
Gene ID: -
Gene Symbol: Smarca2
Alias: 2610209L14Rik|SNF2alpha|Snf2l2|brahma|brm
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 189787 bases
Position: chr19:24523261-24713047
Accession: 99603
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0051970	ResIII	PF04851.15	3.9e-08	1	1
MGP_NZOHlLtJ_P0051971	ResIII	PF04851.15	4e-08	1	1
MGP_NZOHlLtJ_P0051973	ResIII	PF04851.15	2.1e-06	1	1
MGP_NZOHlLtJ_P0051973	BRK	PF07533.16	3.6e-17	1	1
MGP_NZOHlLtJ_P0051970	BRK	PF07533.16	3.8e-17	1	1
MGP_NZOHlLtJ_P0051971	BRK	PF07533.16	3.8e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0051974	-	651	-	MGP_NZOHlLtJ_P0051974	175 (aa)	-	-
MGP_NZOHlLtJ_T0051975	-	661	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0051976	-	1584	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0051977	-	867	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0051970	-	5852	XM_006527281	MGP_NZOHlLtJ_P0051970	1585 (aa)	XP_006527344	A0A140LHE2
MGP_NZOHlLtJ_T0051971	-	5856	-	MGP_NZOHlLtJ_P0051971	1603 (aa)	-	-
MGP_NZOHlLtJ_T0051972	-	5907	-	MGP_NZOHlLtJ_P0051972	1512 (aa)	-	-
MGP_NZOHlLtJ_T0051973	-	4584	-	MGP_NZOHlLtJ_P0051973	1527 (aa)	-	-
MGP_NZOHlLtJ_T0051981	-	788	-	MGP_NZOHlLtJ_P0051981	224 (aa)	-	-
MGP_NZOHlLtJ_T0051980	-	942	-	MGP_NZOHlLtJ_P0051980	254 (aa)	-	-
MGP_NZOHlLtJ_T0051983	-	1846	-	MGP_NZOHlLtJ_P0051983	236 (aa)	-	-
MGP_NZOHlLtJ_T0051982	-	879	-	MGP_NZOHlLtJ_P0051982	276 (aa)	-	-
MGP_NZOHlLtJ_T0051978	-	426	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0051979	-	929	-	MGP_NZOHlLtJ_P0051979	254 (aa)	-	-
MGP_NZOHlLtJ_T0051987	-	956	-	MGP_NZOHlLtJ_P0051987	119 (aa)	-	-
MGP_NZOHlLtJ_T0051984	-	835	-	MGP_NZOHlLtJ_P0051984	235 (aa)	-	-
MGP_NZOHlLtJ_T0051985	-	506	-	MGP_NZOHlLtJ_P0051985	83 (aa)	-	-
MGP_NZOHlLtJ_T0051988	-	736	-	MGP_NZOHlLtJ_P0051988	119 (aa)	-	-
MGP_NZOHlLtJ_T0051986	-	1448	-	MGP_NZOHlLtJ_P0051986	113 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0025477	Smarca2	96	73.829	MGP_NZOHlLtJ_G0034969	Smarca4	92	79.726