EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0025805 (Gene tree)
Gene ID: -
Gene Symbol: Celf2
Alias: B230218O03|B230345P09Rik|C88023|CELF-2|CUG-BP2|Cugbp2|D230046B21Rik|ETR-3|Etr-3|Napor|Napor-2|mETR-3
Full Name: CUGBP%2C Elav-like family member 2
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 979128 bases
Position: chr2:3640227-4619354
Accession: 1338822
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0053031	RRM_1	PF00076.22	2.6e-51	1	3
MGP_NZOHlLtJ_P0053031	RRM_1	PF00076.22	2.6e-51	2	3
MGP_NZOHlLtJ_P0053031	RRM_1	PF00076.22	2.6e-51	3	3
MGP_NZOHlLtJ_P0053034	RRM_1	PF00076.22	2.6e-51	1	3
MGP_NZOHlLtJ_P0053034	RRM_1	PF00076.22	2.6e-51	2	3
MGP_NZOHlLtJ_P0053034	RRM_1	PF00076.22	2.6e-51	3	3
MGP_NZOHlLtJ_P0053040	RRM_1	PF00076.22	2.7e-51	1	3
MGP_NZOHlLtJ_P0053040	RRM_1	PF00076.22	2.7e-51	2	3
MGP_NZOHlLtJ_P0053040	RRM_1	PF00076.22	2.7e-51	3	3
MGP_NZOHlLtJ_P0053041	RRM_1	PF00076.22	2.7e-51	1	3
MGP_NZOHlLtJ_P0053041	RRM_1	PF00076.22	2.7e-51	2	3
MGP_NZOHlLtJ_P0053041	RRM_1	PF00076.22	2.7e-51	3	3
MGP_NZOHlLtJ_P0053042	RRM_1	PF00076.22	2.7e-51	1	3
MGP_NZOHlLtJ_P0053042	RRM_1	PF00076.22	2.7e-51	2	3
MGP_NZOHlLtJ_P0053042	RRM_1	PF00076.22	2.7e-51	3	3
MGP_NZOHlLtJ_P0053037	RRM_1	PF00076.22	3.1e-51	1	3
MGP_NZOHlLtJ_P0053037	RRM_1	PF00076.22	3.1e-51	2	3
MGP_NZOHlLtJ_P0053037	RRM_1	PF00076.22	3.1e-51	3	3
MGP_NZOHlLtJ_P0053032	RRM_1	PF00076.22	3.3e-51	1	3
MGP_NZOHlLtJ_P0053032	RRM_1	PF00076.22	3.3e-51	2	3
MGP_NZOHlLtJ_P0053032	RRM_1	PF00076.22	3.3e-51	3	3
MGP_NZOHlLtJ_P0053035	RRM_1	PF00076.22	3.3e-51	1	3
MGP_NZOHlLtJ_P0053035	RRM_1	PF00076.22	3.3e-51	2	3
MGP_NZOHlLtJ_P0053035	RRM_1	PF00076.22	3.3e-51	3	3
MGP_NZOHlLtJ_P0053039	RRM_1	PF00076.22	3.5e-51	1	3
MGP_NZOHlLtJ_P0053039	RRM_1	PF00076.22	3.5e-51	2	3
MGP_NZOHlLtJ_P0053039	RRM_1	PF00076.22	3.5e-51	3	3
MGP_NZOHlLtJ_P0053038	RRM_1	PF00076.22	5e-39	1	3
MGP_NZOHlLtJ_P0053038	RRM_1	PF00076.22	5e-39	2	3
MGP_NZOHlLtJ_P0053038	RRM_1	PF00076.22	5e-39	3	3
MGP_NZOHlLtJ_P0053043	RRM_1	PF00076.22	5.9e-39	1	3
MGP_NZOHlLtJ_P0053043	RRM_1	PF00076.22	5.9e-39	2	3
MGP_NZOHlLtJ_P0053043	RRM_1	PF00076.22	5.9e-39	3	3
MGP_NZOHlLtJ_P0053033	RRM_1	PF00076.22	6.2e-39	1	3
MGP_NZOHlLtJ_P0053033	RRM_1	PF00076.22	6.2e-39	2	3
MGP_NZOHlLtJ_P0053033	RRM_1	PF00076.22	6.2e-39	3	3
MGP_NZOHlLtJ_P0053036	RRM_1	PF00076.22	6.6e-39	1	3
MGP_NZOHlLtJ_P0053036	RRM_1	PF00076.22	6.6e-39	2	3
MGP_NZOHlLtJ_P0053036	RRM_1	PF00076.22	6.6e-39	3	3
MGP_NZOHlLtJ_P0053050	RRM_1	PF00076.22	7.6e-19	1	1
MGP_NZOHlLtJ_P0053046	RRM_1	PF00076.22	2.4e-15	1	1
MGP_NZOHlLtJ_P0053053	RRM_1	PF00076.22	2.2e-14	1	1
MGP_NZOHlLtJ_P0053055	RRM_1	PF00076.22	1.1e-13	1	1
MGP_NZOHlLtJ_P0053056	RRM_1	PF00076.22	0.00013	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0053037	-	3587	-	MGP_NZOHlLtJ_P0053037	508 (aa)	-	-
MGP_NZOHlLtJ_T0053036	-	3853	-	MGP_NZOHlLtJ_P0053036	472 (aa)	-	-
MGP_NZOHlLtJ_T0053035	-	5461	-	MGP_NZOHlLtJ_P0053035	526 (aa)	-	-
MGP_NZOHlLtJ_T0053034	-	7482	-	MGP_NZOHlLtJ_P0053034	484 (aa)	-	-
MGP_NZOHlLtJ_T0053033	-	8847	-	MGP_NZOHlLtJ_P0053033	478 (aa)	-	-
MGP_NZOHlLtJ_T0053032	-	8729	-	MGP_NZOHlLtJ_P0053032	526 (aa)	-	-
MGP_NZOHlLtJ_T0053031	-	7709	XM_006497333	MGP_NZOHlLtJ_P0053031	484 (aa)	XP_006497396	Q9Z0H4
MGP_NZOHlLtJ_T0053039	-	2525	-	MGP_NZOHlLtJ_P0053039	520 (aa)	-	-
MGP_NZOHlLtJ_T0053038	-	2223	-	MGP_NZOHlLtJ_P0053038	440 (aa)	-	-
MGP_NZOHlLtJ_T0053055	-	529	-	MGP_NZOHlLtJ_P0053055	159 (aa)	-	-
MGP_NZOHlLtJ_T0053054	-	4143	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0053057	-	1972	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0053056	-	331	-	MGP_NZOHlLtJ_P0053056	46 (aa)	-	-
MGP_NZOHlLtJ_T0053051	-	4802	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0053050	-	630	-	MGP_NZOHlLtJ_P0053050	134 (aa)	-	-
MGP_NZOHlLtJ_T0053053	-	402	-	MGP_NZOHlLtJ_P0053053	92 (aa)	-	-
MGP_NZOHlLtJ_T0053052	-	2075	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0053058	-	769	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0053046	-	1024	-	MGP_NZOHlLtJ_P0053046	276 (aa)	-	-
MGP_NZOHlLtJ_T0053047	-	4798	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0053044	-	1996	-	MGP_NZOHlLtJ_P0053044	443 (aa)	-	-
MGP_NZOHlLtJ_T0053045	-	1240	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0053042	-	2338	-	MGP_NZOHlLtJ_P0053042	490 (aa)	-	-
MGP_NZOHlLtJ_T0053043	-	2177	-	MGP_NZOHlLtJ_P0053043	460 (aa)	-	-
MGP_NZOHlLtJ_T0053040	-	1721	-	MGP_NZOHlLtJ_P0053040	488 (aa)	-	-
MGP_NZOHlLtJ_T0053041	-	2332	-	MGP_NZOHlLtJ_P0053041	488 (aa)	-	-
MGP_NZOHlLtJ_T0053048	-	405	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0053049	-	923	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0025805's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0025805's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0025805	Celf2	90	55.556	MGP_NZOHlLtJ_G0024664	Celf4	95	46.304
MGP_NZOHlLtJ_G0025805	Celf2	57	34.884	MGP_NZOHlLtJ_G0027313	Pabpc1l	53	34.884
MGP_NZOHlLtJ_G0025805	Celf2	59	37.500	MGP_NZOHlLtJ_G0029200	Pabpc4	93	30.323
MGP_NZOHlLtJ_G0025805	Celf2	92	53.659	MGP_NZOHlLtJ_G0017995	Celf5	93	59.770
MGP_NZOHlLtJ_G0025805	Celf2	82	33.333	MGP_NZOHlLtJ_G0017921	Cirbp	80	32.558
MGP_NZOHlLtJ_G0025805	Celf2	61	35.714	MGP_NZOHlLtJ_G0016473	Boll	57	32.000
MGP_NZOHlLtJ_G0025805	Celf2	82	34.667	MGP_NZOHlLtJ_G0034984	Elavl3	73	40.741
MGP_NZOHlLtJ_G0025805	Celf2	88	32.099	MGP_NZOHlLtJ_G0036263	Rbmx	78	30.000
MGP_NZOHlLtJ_G0025805	Celf2	57	37.500	MGP_NZOHlLtJ_G0028534	-	62	37.500
MGP_NZOHlLtJ_G0025805	Celf2	51	35.443	MGP_NZOHlLtJ_G0031438	Tia1	83	35.443
MGP_NZOHlLtJ_G0025805	Celf2	57	34.211	MGP_NZOHlLtJ_G0023576	Pabpc6	51	34.211
MGP_NZOHlLtJ_G0025805	Celf2	57	35.714	MGP_NZOHlLtJ_G0022226	Pabpc1	51	34.884
MGP_NZOHlLtJ_G0025805	Celf2	100	88.060	MGP_NZOHlLtJ_G0026612	Celf1	100	80.082
MGP_NZOHlLtJ_G0025805	Celf2	79	80.952	MGP_NZOHlLtJ_G0035416	Celf6	91	45.567
MGP_NZOHlLtJ_G0025805	Celf2	94	83.333	MGP_NZOHlLtJ_G0028026	Celf3	90	55.801
MGP_NZOHlLtJ_G0025805	Celf2	77	39.474	MGP_NZOHlLtJ_G0035919	Rbms3	75	37.079
MGP_NZOHlLtJ_G0025805	Celf2	64	43.210	MGP_NZOHlLtJ_G0033843	Elavl1	81	43.210
MGP_NZOHlLtJ_G0025805	Celf2	77	39.474	MGP_NZOHlLtJ_G0018283	Rbms2	51	39.474
MGP_NZOHlLtJ_G0025805	Celf2	87	33.333	MGP_NZOHlLtJ_G0028903	Elavl2	83	39.506
MGP_NZOHlLtJ_G0025805	Celf2	61	38.272	MGP_NZOHlLtJ_G0029034	Elavl4	81	38.272
MGP_NZOHlLtJ_G0025805	Celf2	61	34.177	MGP_NZOHlLtJ_G0033595	Tial1	65	31.481