EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0026193 (Gene tree)
Gene ID: -
Gene Symbol: Zeb2
Alias: 9130203F04Rik|D130016B08Rik|SIP1|Sip1|Zfhx1b|Zfx1b|Zfxh1b
Full Name: zinc finger E-box binding homeobox 2
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 135460 bases
Position: chr2:43490737-43626196
Accession: 1344407
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0055248	zf-C2H2	PF00096.26	1.8e-24	1	5
MGP_NZOHlLtJ_P0055248	zf-C2H2	PF00096.26	1.8e-24	2	5
MGP_NZOHlLtJ_P0055248	zf-C2H2	PF00096.26	1.8e-24	3	5
MGP_NZOHlLtJ_P0055248	zf-C2H2	PF00096.26	1.8e-24	4	5
MGP_NZOHlLtJ_P0055248	zf-C2H2	PF00096.26	1.8e-24	5	5
MGP_NZOHlLtJ_P0055250	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_NZOHlLtJ_P0055250	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_NZOHlLtJ_P0055250	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_NZOHlLtJ_P0055250	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_NZOHlLtJ_P0055250	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_NZOHlLtJ_P0055244	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_NZOHlLtJ_P0055244	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_NZOHlLtJ_P0055244	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_NZOHlLtJ_P0055244	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_NZOHlLtJ_P0055244	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_NZOHlLtJ_P0055247	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_NZOHlLtJ_P0055247	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_NZOHlLtJ_P0055247	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_NZOHlLtJ_P0055247	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_NZOHlLtJ_P0055247	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_NZOHlLtJ_P0055249	zf-C2H2	PF00096.26	2.1e-24	1	5
MGP_NZOHlLtJ_P0055249	zf-C2H2	PF00096.26	2.1e-24	2	5
MGP_NZOHlLtJ_P0055249	zf-C2H2	PF00096.26	2.1e-24	3	5
MGP_NZOHlLtJ_P0055249	zf-C2H2	PF00096.26	2.1e-24	4	5
MGP_NZOHlLtJ_P0055249	zf-C2H2	PF00096.26	2.1e-24	5	5
MGP_NZOHlLtJ_P0055246	zf-C2H2	PF00096.26	2.9e-24	1	5
MGP_NZOHlLtJ_P0055246	zf-C2H2	PF00096.26	2.9e-24	2	5
MGP_NZOHlLtJ_P0055246	zf-C2H2	PF00096.26	2.9e-24	3	5
MGP_NZOHlLtJ_P0055246	zf-C2H2	PF00096.26	2.9e-24	4	5
MGP_NZOHlLtJ_P0055246	zf-C2H2	PF00096.26	2.9e-24	5	5
MGP_NZOHlLtJ_P0055251	zf-C2H2	PF00096.26	1.2e-17	1	4
MGP_NZOHlLtJ_P0055251	zf-C2H2	PF00096.26	1.2e-17	2	4
MGP_NZOHlLtJ_P0055251	zf-C2H2	PF00096.26	1.2e-17	3	4
MGP_NZOHlLtJ_P0055251	zf-C2H2	PF00096.26	1.2e-17	4	4
MGP_NZOHlLtJ_P0055245	zf-C2H2	PF00096.26	1.2e-15	1	3
MGP_NZOHlLtJ_P0055245	zf-C2H2	PF00096.26	1.2e-15	2	3
MGP_NZOHlLtJ_P0055245	zf-C2H2	PF00096.26	1.2e-15	3	3
MGP_NZOHlLtJ_P0055248	zf-met	PF12874.7	1.4e-06	1	1
MGP_NZOHlLtJ_P0055250	zf-met	PF12874.7	1.7e-06	1	1
MGP_NZOHlLtJ_P0055244	zf-met	PF12874.7	1.7e-06	1	1
MGP_NZOHlLtJ_P0055247	zf-met	PF12874.7	1.7e-06	1	1
MGP_NZOHlLtJ_P0055249	zf-met	PF12874.7	1.7e-06	1	1
MGP_NZOHlLtJ_P0055246	zf-met	PF12874.7	2.3e-06	1	1
MGP_NZOHlLtJ_P0055251	zf-met	PF12874.7	5.8e-05	1	2
MGP_NZOHlLtJ_P0055251	zf-met	PF12874.7	5.8e-05	2	2
MGP_NZOHlLtJ_P0055245	zf-met	PF12874.7	0.00041	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0055268	-	370	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0055269	-	644	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0055246	-	5334	-	MGP_NZOHlLtJ_P0055246	1259 (aa)	-	-
MGP_NZOHlLtJ_T0055247	-	5623	-	MGP_NZOHlLtJ_P0055247	1215 (aa)	-	-
MGP_NZOHlLtJ_T0055244	-	9127	XM_006498042	MGP_NZOHlLtJ_P0055244	1215 (aa)	XP_006498105	Q9R0G7
MGP_NZOHlLtJ_T0055245	-	1762	-	MGP_NZOHlLtJ_P0055245	220 (aa)	-	-
MGP_NZOHlLtJ_T0055260	-	2918	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0055261	-	550	-	MGP_NZOHlLtJ_P0055261	91 (aa)	-	-
MGP_NZOHlLtJ_T0055248	-	4063	-	MGP_NZOHlLtJ_P0055248	1191 (aa)	-	-
MGP_NZOHlLtJ_T0055249	-	4020	-	MGP_NZOHlLtJ_P0055249	1215 (aa)	-	-
MGP_NZOHlLtJ_T0055263	-	462	-	MGP_NZOHlLtJ_P0055263	83 (aa)	-	-
MGP_NZOHlLtJ_T0055265	-	2608	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0055266	-	2690	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0055267	-	2989	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0055264	-	2068	-	MGP_NZOHlLtJ_P0055264	37 (aa)	-	-
MGP_NZOHlLtJ_T0055262	-	577	-	MGP_NZOHlLtJ_P0055262	63 (aa)	-	-
MGP_NZOHlLtJ_T0055251	-	2236	-	MGP_NZOHlLtJ_P0055251	731 (aa)	-	-
MGP_NZOHlLtJ_T0055250	-	3913	-	MGP_NZOHlLtJ_P0055250	1214 (aa)	-	-
MGP_NZOHlLtJ_T0055253	-	240	-	MGP_NZOHlLtJ_P0055253	79 (aa)	-	-
MGP_NZOHlLtJ_T0055252	-	868	-	MGP_NZOHlLtJ_P0055252	214 (aa)	-	-
MGP_NZOHlLtJ_T0055255	-	453	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0055254	-	709	-	MGP_NZOHlLtJ_P0055254	184 (aa)	-	-
MGP_NZOHlLtJ_T0055257	-	618	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0055256	-	631	-	MGP_NZOHlLtJ_P0055256	141 (aa)	-	-
MGP_NZOHlLtJ_T0055259	-	2690	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0055258	-	443	-	MGP_NZOHlLtJ_P0055258	113 (aa)	-	-
MGP_NZOHlLtJ_T0055271	-	432	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0055270	-	3831	-	-	- (aa)	-	-

Gene Model

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Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0026193's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0026193	Zeb2	97	62.150	MGP_NZOHlLtJ_G0024579	Zeb1	100	69.340