EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0026612 (Gene tree)
Gene ID: -
Gene Symbol: Celf1
Alias: 1600010O03Rik|AA407467|Brunol2|CUG-BP|CUG-BP1|CUGBP|Cugbp|Cugbp1|D2Wsu101e|HNAB50|NAB50
Full Name: CUGBP%2C Elav-like family member 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 84191 bases
Position: chr2:91051051-91135241
Accession: 1342295
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0056618	RRM_1	PF00076.22	4.1e-52	1	3
MGP_NZOHlLtJ_P0056618	RRM_1	PF00076.22	4.1e-52	2	3
MGP_NZOHlLtJ_P0056618	RRM_1	PF00076.22	4.1e-52	3	3
MGP_NZOHlLtJ_P0056612	RRM_1	PF00076.22	4.2e-52	1	3
MGP_NZOHlLtJ_P0056612	RRM_1	PF00076.22	4.2e-52	2	3
MGP_NZOHlLtJ_P0056612	RRM_1	PF00076.22	4.2e-52	3	3
MGP_NZOHlLtJ_P0056617	RRM_1	PF00076.22	5.3e-52	1	3
MGP_NZOHlLtJ_P0056617	RRM_1	PF00076.22	5.3e-52	2	3
MGP_NZOHlLtJ_P0056617	RRM_1	PF00076.22	5.3e-52	3	3
MGP_NZOHlLtJ_P0056615	RRM_1	PF00076.22	6.7e-52	1	3
MGP_NZOHlLtJ_P0056615	RRM_1	PF00076.22	6.7e-52	2	3
MGP_NZOHlLtJ_P0056615	RRM_1	PF00076.22	6.7e-52	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0056614	-	478	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0056615	-	6959	-	MGP_NZOHlLtJ_P0056615	543 (aa)	-	-
MGP_NZOHlLtJ_T0056616	-	271	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0056617	-	7577	-	MGP_NZOHlLtJ_P0056617	513 (aa)	-	-
MGP_NZOHlLtJ_T0056611	-	350	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0056612	-	7849	-	MGP_NZOHlLtJ_P0056612	487 (aa)	-	-
MGP_NZOHlLtJ_T0056613	-	426	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0056618	-	4430	-	MGP_NZOHlLtJ_P0056618	483 (aa)	-	-
MGP_NZOHlLtJ_T0056619	-	486	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0026612	Celf1	97	43.320	MGP_NZOHlLtJ_G0028026	Celf3	99	43.830
MGP_NZOHlLtJ_G0026612	Celf1	61	45.679	MGP_NZOHlLtJ_G0033843	Elavl1	83	45.679
MGP_NZOHlLtJ_G0026612	Celf1	70	38.636	MGP_NZOHlLtJ_G0029200	Pabpc4	93	32.258
MGP_NZOHlLtJ_G0026612	Celf1	98	45.135	MGP_NZOHlLtJ_G0035416	Celf6	91	45.549
MGP_NZOHlLtJ_G0026612	Celf1	98	44.650	MGP_NZOHlLtJ_G0017995	Celf5	93	56.322
MGP_NZOHlLtJ_G0026612	Celf1	53	43.421	MGP_NZOHlLtJ_G0035919	Rbms3	68	43.421
MGP_NZOHlLtJ_G0026612	Celf1	69	41.975	MGP_NZOHlLtJ_G0028903	Elavl2	85	41.975
MGP_NZOHlLtJ_G0026612	Celf1	62	40.741	MGP_NZOHlLtJ_G0029034	Elavl4	78	40.741
MGP_NZOHlLtJ_G0026612	Celf1	100	45.200	MGP_NZOHlLtJ_G0024664	Celf4	100	42.430
MGP_NZOHlLtJ_G0026612	Celf1	57	43.590	MGP_NZOHlLtJ_G0034984	Elavl3	71	42.391
MGP_NZOHlLtJ_G0026612	Celf1	57	37.879	MGP_NZOHlLtJ_G0027667	Pabpc4l	65	34.211
MGP_NZOHlLtJ_G0026612	Celf1	100	80.082	MGP_NZOHlLtJ_G0025805	Celf2	100	88.060
MGP_NZOHlLtJ_G0026612	Celf1	52	35.526	MGP_NZOHlLtJ_G0023576	Pabpc6	53	35.526