EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0026928 (Gene tree)
Gene ID: -
Gene Symbol: Snrnp200
Alias: A330064G03Rik|Ascc3l1|BC011390|HELIC2|Kiaa0788|U5-200-KD|U5-200KD
Full Name: small nuclear ribonucleoprotein 200 (U5)
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 35825 bases
Position: chr2:128794836-128830660
Accession: 2444401
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0058077	ResIII	PF04851.15	3.1e-25	1	2
MGP_NZOHlLtJ_P0058077	ResIII	PF04851.15	3.1e-25	2	2
MGP_NZOHlLtJ_P0058077	DEAD	PF00270.29	4.1e-52	1	2
MGP_NZOHlLtJ_P0058077	DEAD	PF00270.29	4.1e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0058076	-	2923	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0058077	-	6745	-	MGP_NZOHlLtJ_P0058077	2136 (aa)	-	-
MGP_NZOHlLtJ_T0058080	-	741	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0058078	-	593	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0058079	-	722	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0026928's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0026928's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0026928	Snrnp200	86	42.051	MGP_NZOHlLtJ_G0017643	Ascc3	81	44.301
MGP_NZOHlLtJ_G0026928	Snrnp200	63	34.856	MGP_NZOHlLtJ_G0030296	Hfm1	53	35.377