EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0027240 (Gene tree)
Gene ID: -
Gene Symbol: Rbm39
Alias: 1500012C14Rik|2310040E03Rik|B330012G18Rik|C79248|Caper|Caper alpha|R75070|Rnpc2|caper
Full Name: RNA binding motif protein 39
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 35424 bases
Position: chr2:158979287-159014710
Accession: 2157953
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0059332	RRM_1	PF00076.22	1.3e-41	1	2
MGP_NZOHlLtJ_P0059332	RRM_1	PF00076.22	1.3e-41	2	2
MGP_NZOHlLtJ_P0059333	RRM_1	PF00076.22	1.7e-41	1	2
MGP_NZOHlLtJ_P0059333	RRM_1	PF00076.22	1.7e-41	2	2
MGP_NZOHlLtJ_P0059334	RRM_1	PF00076.22	1.7e-41	1	2
MGP_NZOHlLtJ_P0059334	RRM_1	PF00076.22	1.7e-41	2	2
MGP_NZOHlLtJ_P0059338	RRM_1	PF00076.22	2.3e-22	1	1
MGP_NZOHlLtJ_P0059339	RRM_1	PF00076.22	9.5e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0059336	-	2120	-	MGP_NZOHlLtJ_P0059336	40 (aa)	-	-
MGP_NZOHlLtJ_T0059337	-	2127	-	MGP_NZOHlLtJ_P0059337	47 (aa)	-	-
MGP_NZOHlLtJ_T0059334	-	2711	-	MGP_NZOHlLtJ_P0059334	524 (aa)	-	-
MGP_NZOHlLtJ_T0059335	-	2744	-	MGP_NZOHlLtJ_P0059335	415 (aa)	-	-
MGP_NZOHlLtJ_T0059332	-	2810	XM_006498832	MGP_NZOHlLtJ_P0059332	530 (aa)	XP_006498895	Q8VH51
MGP_NZOHlLtJ_T0059333	-	2580	-	MGP_NZOHlLtJ_P0059333	524 (aa)	-	-
MGP_NZOHlLtJ_T0059338	-	931	-	MGP_NZOHlLtJ_P0059338	310 (aa)	-	-
MGP_NZOHlLtJ_T0059339	-	1090	-	MGP_NZOHlLtJ_P0059339	273 (aa)	-	-
MGP_NZOHlLtJ_T0059350	-	585	-	MGP_NZOHlLtJ_P0059350	62 (aa)	-	-
MGP_NZOHlLtJ_T0059351	-	743	-	MGP_NZOHlLtJ_P0059351	40 (aa)	-	-
MGP_NZOHlLtJ_T0059352	-	667	-	MGP_NZOHlLtJ_P0059352	38 (aa)	-	-
MGP_NZOHlLtJ_T0059353	-	672	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059354	-	699	-	MGP_NZOHlLtJ_P0059354	40 (aa)	-	-
MGP_NZOHlLtJ_T0059355	-	1008	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059356	-	715	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059347	-	707	-	MGP_NZOHlLtJ_P0059347	40 (aa)	-	-
MGP_NZOHlLtJ_T0059346	-	685	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059345	-	714	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059344	-	497	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059343	-	754	-	MGP_NZOHlLtJ_P0059343	156 (aa)	-	-
MGP_NZOHlLtJ_T0059342	-	1462	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059341	-	546	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059340	-	695	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059349	-	710	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059348	-	593	-	MGP_NZOHlLtJ_P0059348	39 (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0027240	Rbm39	52	34.483	MGP_NZOHlLtJ_G0017927	Dazap1	94	34.483