EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0027386 (Gene tree)
Gene ID: -
Gene Symbol: Ddx27
Alias: C86129
Full Name: DEAD (Asp-Glu-Ala-Asp) box polypeptide 27
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 21138 bases
Position: chr2:170457216-170478353
Accession: 2385884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0059995	ResIII	PF04851.15	1.6e-06	1	1
MGP_NZOHlLtJ_P0059995	DEAD	PF00270.29	7.2e-45	1	1
MGP_NZOHlLtJ_P0059996	DEAD	PF00270.29	2.4e-18	1	1
MGP_NZOHlLtJ_P0059997	DEAD	PF00270.29	6e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0060000	-	708	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059996	-	2151	-	MGP_NZOHlLtJ_P0059996	292 (aa)	-	-
MGP_NZOHlLtJ_T0059997	-	955	-	MGP_NZOHlLtJ_P0059997	310 (aa)	-	-
MGP_NZOHlLtJ_T0059995	-	2714	XM_006499422	MGP_NZOHlLtJ_P0059995	760 (aa)	XP_006499485	Q921N6
MGP_NZOHlLtJ_T0059998	-	264	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0059999	-	649	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0027386's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0027386's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0027386	Ddx27	59	33.696	MGP_NZOHlLtJ_G0034213	Ddx49	97	38.177
MGP_NZOHlLtJ_G0027386	Ddx27	52	34.129	MGP_NZOHlLtJ_G0017737	Ddx50	61	34.272
MGP_NZOHlLtJ_G0027386	Ddx27	54	31.655	MGP_NZOHlLtJ_G0024083	Ddx39b	84	32.970
MGP_NZOHlLtJ_G0027386	Ddx27	53	31.019	MGP_NZOHlLtJ_G0018451	Ddx56	98	33.065
MGP_NZOHlLtJ_G0027386	Ddx27	56	32.558	MGP_NZOHlLtJ_G0022501	Ddx17	56	33.880
MGP_NZOHlLtJ_G0027386	Ddx27	51	35.938	MGP_NZOHlLtJ_G0020469	Ddx24	56	35.938
MGP_NZOHlLtJ_G0027386	Ddx27	53	38.221	MGP_NZOHlLtJ_G0016852	Ddx18	61	38.462