EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0027500 (Gene tree)
Gene ID: -
Gene Symbol: Arfrp1
Alias: 1500006I01Rik|AI480700
Full Name: ADP-ribosylation factor related protein 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 7496 bases
Position: chr2:185580209-185587704
Accession: 1923938
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0060476	MMR_HSR1	PF01926.23	2.1e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0060480	-	434	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0060481	-	555	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0060479	-	662	-	MGP_NZOHlLtJ_P0060479	62 (aa)	-	-
MGP_NZOHlLtJ_T0060478	-	748	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0060475	-	1087	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0060474	-	1822	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0060477	-	835	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0060476	-	733	-	MGP_NZOHlLtJ_P0060476	201 (aa)	-	-
MGP_NZOHlLtJ_T0060473	-	2179	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0060472	-	2318	XM_011239965	MGP_NZOHlLtJ_P0060472	121 (aa)	XP_011238267	Q8BXL7

Gene Model

Click here to download MGP_NZOHlLtJ_G0027500's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0027500's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0027500	Arfrp1	93	38.793	MGP_NZOHlLtJ_G0019700	Arf2	96	33.333
MGP_NZOHlLtJ_G0027500	Arfrp1	79	41.837	MGP_NZOHlLtJ_G0018067	Arl1	98	33.862
MGP_NZOHlLtJ_G0027500	Arfrp1	93	38.938	MGP_NZOHlLtJ_G0026209	Arl5a	97	38.587
MGP_NZOHlLtJ_G0027500	Arfrp1	91	38.182	MGP_NZOHlLtJ_G0025211	Arl2	97	35.106
MGP_NZOHlLtJ_G0027500	Arfrp1	93	38.793	MGP_NZOHlLtJ_G0018826	Arf1	96	33.871
MGP_NZOHlLtJ_G0027500	Arfrp1	92	40.000	MGP_NZOHlLtJ_G0025683	Arl3	96	40.000
MGP_NZOHlLtJ_G0027500	Arfrp1	87	37.273	MGP_NZOHlLtJ_G0021865	Arl11	94	34.659
MGP_NZOHlLtJ_G0027500	Arfrp1	84	36.538	MGP_NZOHlLtJ_G0027771	Arl14	83	35.503
MGP_NZOHlLtJ_G0027500	Arfrp1	85	34.286	MGP_NZOHlLtJ_G0016724	Arl4c	86	34.286
MGP_NZOHlLtJ_G0027500	Arfrp1	93	31.304	MGP_NZOHlLtJ_G0031568	Arl8b	74	31.724
MGP_NZOHlLtJ_G0027500	Arfrp1	90	38.393	MGP_NZOHlLtJ_G0030975	Arf5	94	34.225
MGP_NZOHlLtJ_G0027500	Arfrp1	93	33.929	MGP_NZOHlLtJ_G0023366	Arl6	92	30.387
MGP_NZOHlLtJ_G0027500	Arfrp1	84	40.196	MGP_NZOHlLtJ_G0025840	Arl5b	92	37.126
MGP_NZOHlLtJ_G0027500	Arfrp1	87	32.222	MGP_NZOHlLtJ_G0019639	Arl4d	85	32.222
MGP_NZOHlLtJ_G0027500	Arfrp1	93	37.931	MGP_NZOHlLtJ_G0022734	Arf3	96	33.333
MGP_NZOHlLtJ_G0027500	Arfrp1	87	35.185	MGP_NZOHlLtJ_G0030446	Rab35	59	32.576
MGP_NZOHlLtJ_G0027500	Arfrp1	91	40.000	MGP_NZOHlLtJ_G0020130	Arl4a	90	34.896
MGP_NZOHlLtJ_G0027500	Arfrp1	93	40.708	MGP_NZOHlLtJ_G0019480	Arl5c	96	37.705
MGP_NZOHlLtJ_G0027500	Arfrp1	71	30.070	MGP_NZOHlLtJ_G0016957	Arl8a	73	30.070