EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0028022 (Gene tree)
Gene ID: -
Gene Symbol: Tdrkh
Alias: 2700091C21Rik|Tdrd2
Full Name: tudor and KH domain containing protein
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 18210 bases
Position: chr3:93869383-93887592
Accession: 1919884
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0062834	KH_1	PF00013.29	1.9e-34	1	2
MGP_NZOHlLtJ_P0062834	KH_1	PF00013.29	1.9e-34	2	2
MGP_NZOHlLtJ_P0062833	KH_1	PF00013.29	1.2e-33	1	2
MGP_NZOHlLtJ_P0062833	KH_1	PF00013.29	1.2e-33	2	2
MGP_NZOHlLtJ_P0062836	KH_1	PF00013.29	5.8e-28	1	2
MGP_NZOHlLtJ_P0062836	KH_1	PF00013.29	5.8e-28	2	2
MGP_NZOHlLtJ_P0062835	KH_1	PF00013.29	3e-19	1	1
MGP_NZOHlLtJ_P0062835	TUDOR	PF00567.24	4.7e-29	1	1
MGP_NZOHlLtJ_P0062836	TUDOR	PF00567.24	5.4e-29	1	1
MGP_NZOHlLtJ_P0062833	TUDOR	PF00567.24	5.4e-29	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0062833	-	1760	-	MGP_NZOHlLtJ_P0062833	560 (aa)	-	-
MGP_NZOHlLtJ_T0062832	-	476	XM_006502138	MGP_NZOHlLtJ_P0062832	50 (aa)	XP_006502201	Q80VL1
MGP_NZOHlLtJ_T0062836	-	2586	-	MGP_NZOHlLtJ_P0062836	556 (aa)	-	-
MGP_NZOHlLtJ_T0062835	-	2476	-	MGP_NZOHlLtJ_P0062835	515 (aa)	-	-
MGP_NZOHlLtJ_T0062834	-	1231	-	MGP_NZOHlLtJ_P0062834	296 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0028022's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0028022's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0028022	Tdrkh	52	30.625	MGP_NZOHlLtJ_G0031186	Igf2bp3	55	30.625
MGP_NZOHlLtJ_G0028022	Tdrkh	74	31.707	MGP_NZOHlLtJ_G0026063	Fubp3	79	31.707