EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0028026 (Gene tree)
Gene ID: -
Gene Symbol: Celf3
Alias: 4930415M08Rik|BRUNOL1|CAGH4|ERDA4|Tnrc4
Full Name: CUGBP%2C Elav-like family member 3
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 13887 bases
Position: chr3:93936174-93950060
Accession: 1926034
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0062853	RRM_1	PF00076.22	9.3e-54	1	3
MGP_NZOHlLtJ_P0062853	RRM_1	PF00076.22	9.3e-54	2	3
MGP_NZOHlLtJ_P0062853	RRM_1	PF00076.22	9.3e-54	3	3
MGP_NZOHlLtJ_P0062852	RRM_1	PF00076.22	1.5e-53	1	3
MGP_NZOHlLtJ_P0062852	RRM_1	PF00076.22	1.5e-53	2	3
MGP_NZOHlLtJ_P0062852	RRM_1	PF00076.22	1.5e-53	3	3
MGP_NZOHlLtJ_P0062854	RRM_1	PF00076.22	2e-53	1	3
MGP_NZOHlLtJ_P0062854	RRM_1	PF00076.22	2e-53	2	3
MGP_NZOHlLtJ_P0062854	RRM_1	PF00076.22	2e-53	3	3
MGP_NZOHlLtJ_P0062859	RRM_1	PF00076.22	6.9e-16	1	1
MGP_NZOHlLtJ_P0062860	RRM_1	PF00076.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0062861	-	3378	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0062851	-	361	XM_006502323	MGP_NZOHlLtJ_P0062851	31 (aa)	XP_006502386	Q8CIN6
MGP_NZOHlLtJ_T0062860	-	726	-	MGP_NZOHlLtJ_P0062860	231 (aa)	-	-
MGP_NZOHlLtJ_T0062853	-	2356	-	MGP_NZOHlLtJ_P0062853	416 (aa)	-	-
MGP_NZOHlLtJ_T0062852	-	2749	-	MGP_NZOHlLtJ_P0062852	465 (aa)	-	-
MGP_NZOHlLtJ_T0062855	-	1193	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0062854	-	4099	-	MGP_NZOHlLtJ_P0062854	494 (aa)	-	-
MGP_NZOHlLtJ_T0062857	-	2446	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0062856	-	669	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0062859	-	779	-	MGP_NZOHlLtJ_P0062859	182 (aa)	-	-
MGP_NZOHlLtJ_T0062858	-	2937	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0062862	-	889	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0062863	-	855	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0028026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0028026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0028026	Celf3	77	37.805	MGP_NZOHlLtJ_G0031438	Tia1	93	38.667
MGP_NZOHlLtJ_G0028026	Celf3	61	40.741	MGP_NZOHlLtJ_G0029034	Elavl4	85	40.741
MGP_NZOHlLtJ_G0028026	Celf3	81	87.368	MGP_NZOHlLtJ_G0035416	Celf6	75	85.526
MGP_NZOHlLtJ_G0028026	Celf3	99	43.830	MGP_NZOHlLtJ_G0026612	Celf1	97	43.320
MGP_NZOHlLtJ_G0028026	Celf3	90	55.801	MGP_NZOHlLtJ_G0025805	Celf2	94	83.333
MGP_NZOHlLtJ_G0028026	Celf3	69	33.784	MGP_NZOHlLtJ_G0029200	Pabpc4	93	32.394
MGP_NZOHlLtJ_G0028026	Celf3	63	41.975	MGP_NZOHlLtJ_G0028903	Elavl2	76	41.975
MGP_NZOHlLtJ_G0028026	Celf3	98	35.632	MGP_NZOHlLtJ_G0034984	Elavl3	89	34.940
MGP_NZOHlLtJ_G0028026	Celf3	98	35.632	MGP_NZOHlLtJ_G0033843	Elavl1	95	44.444
MGP_NZOHlLtJ_G0028026	Celf3	91	39.474	MGP_NZOHlLtJ_G0035919	Rbms3	76	39.474
MGP_NZOHlLtJ_G0028026	Celf3	80	37.500	MGP_NZOHlLtJ_G0023576	Pabpc6	72	36.585
MGP_NZOHlLtJ_G0028026	Celf3	67	32.857	MGP_NZOHlLtJ_G0027313	Pabpc1l	57	34.118
MGP_NZOHlLtJ_G0028026	Celf3	100	69.072	MGP_NZOHlLtJ_G0024664	Celf4	97	65.971
MGP_NZOHlLtJ_G0028026	Celf3	67	32.407	MGP_NZOHlLtJ_G0028534	-	55	36.782
MGP_NZOHlLtJ_G0028026	Celf3	100	66.848	MGP_NZOHlLtJ_G0017995	Celf5	93	76.744
MGP_NZOHlLtJ_G0028026	Celf3	70	34.091	MGP_NZOHlLtJ_G0033595	Tial1	81	37.333