EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0028447 (Gene tree)
Gene ID: -
Gene Symbol: Rpf1
Alias: 2210420E24Rik|2310066N05Rik|Bxdc5
Full Name: ribosome production factor 1 homolog
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 15675 bases
Position: chr3:148084739-148100413
Accession: 1917535
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0064897	Brix	PF04427.18	8.4e-26	1	1
MGP_NZOHlLtJ_P0064898	Brix	PF04427.18	6.7e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0064897	-	1661	XM_006502050	MGP_NZOHlLtJ_P0064897	349 (aa)	XP_006502113	Q7TND5
MGP_NZOHlLtJ_T0064900	-	807	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0064901	-	1978	-	MGP_NZOHlLtJ_P0064901	212 (aa)	-	-
MGP_NZOHlLtJ_T0064899	-	813	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0064898	-	1120	-	MGP_NZOHlLtJ_P0064898	146 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0028447's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0028447's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0028447	Rpf1	87	40.625	MGP_NZOHlLtJ_G0016346	Imp4	71	37.321