EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0028461 (Gene tree)
Gene ID: -
Gene Symbol: Fubp1
Alias: 9530027K12Rik|D3Ertd330e|FBP|Fubp|Fubp4
Full Name: far upstream element (FUSE) binding protein 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 26403 bases
Position: chr3:154056887-154083289
Accession: 1196294
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0064983	KH_1	PF00013.29	7.2e-70	1	4
MGP_NZOHlLtJ_P0064983	KH_1	PF00013.29	7.2e-70	2	4
MGP_NZOHlLtJ_P0064983	KH_1	PF00013.29	7.2e-70	3	4
MGP_NZOHlLtJ_P0064983	KH_1	PF00013.29	7.2e-70	4	4
MGP_NZOHlLtJ_P0064980	KH_1	PF00013.29	2.2e-69	1	4
MGP_NZOHlLtJ_P0064980	KH_1	PF00013.29	2.2e-69	2	4
MGP_NZOHlLtJ_P0064980	KH_1	PF00013.29	2.2e-69	3	4
MGP_NZOHlLtJ_P0064980	KH_1	PF00013.29	2.2e-69	4	4
MGP_NZOHlLtJ_P0064986	KH_1	PF00013.29	2.2e-69	1	4
MGP_NZOHlLtJ_P0064986	KH_1	PF00013.29	2.2e-69	2	4
MGP_NZOHlLtJ_P0064986	KH_1	PF00013.29	2.2e-69	3	4
MGP_NZOHlLtJ_P0064986	KH_1	PF00013.29	2.2e-69	4	4
MGP_NZOHlLtJ_P0064984	KH_1	PF00013.29	2.4e-69	1	4
MGP_NZOHlLtJ_P0064984	KH_1	PF00013.29	2.4e-69	2	4
MGP_NZOHlLtJ_P0064984	KH_1	PF00013.29	2.4e-69	3	4
MGP_NZOHlLtJ_P0064984	KH_1	PF00013.29	2.4e-69	4	4
MGP_NZOHlLtJ_P0064982	KH_1	PF00013.29	2.4e-69	1	4
MGP_NZOHlLtJ_P0064982	KH_1	PF00013.29	2.4e-69	2	4
MGP_NZOHlLtJ_P0064982	KH_1	PF00013.29	2.4e-69	3	4
MGP_NZOHlLtJ_P0064982	KH_1	PF00013.29	2.4e-69	4	4
MGP_NZOHlLtJ_P0064981	KH_1	PF00013.29	7.6e-38	1	2
MGP_NZOHlLtJ_P0064981	KH_1	PF00013.29	7.6e-38	2	2
MGP_NZOHlLtJ_P0064990	KH_1	PF00013.29	1.1e-16	1	1
MGP_NZOHlLtJ_P0064983	KH_2	PF07650.17	1.3e-22	1	2
MGP_NZOHlLtJ_P0064983	KH_2	PF07650.17	1.3e-22	2	2
MGP_NZOHlLtJ_P0064986	KH_2	PF07650.17	3.4e-22	1	2
MGP_NZOHlLtJ_P0064986	KH_2	PF07650.17	3.4e-22	2	2
MGP_NZOHlLtJ_P0064984	KH_2	PF07650.17	3.6e-22	1	2
MGP_NZOHlLtJ_P0064984	KH_2	PF07650.17	3.6e-22	2	2
MGP_NZOHlLtJ_P0064982	KH_2	PF07650.17	3.7e-22	1	2
MGP_NZOHlLtJ_P0064982	KH_2	PF07650.17	3.7e-22	2	2
MGP_NZOHlLtJ_P0064980	KH_2	PF07650.17	3.7e-22	1	2
MGP_NZOHlLtJ_P0064980	KH_2	PF07650.17	3.7e-22	2	2
MGP_NZOHlLtJ_P0064981	KH_2	PF07650.17	3.8e-10	1	1
MGP_NZOHlLtJ_P0064990	KH_2	PF07650.17	5.3e-06	1	1
MGP_NZOHlLtJ_P0064994	DUF1897	PF09005.10	1.7e-12	1	2
MGP_NZOHlLtJ_P0064994	DUF1897	PF09005.10	1.7e-12	2	2
MGP_NZOHlLtJ_P0064992	DUF1897	PF09005.10	2.1e-12	1	2
MGP_NZOHlLtJ_P0064992	DUF1897	PF09005.10	2.1e-12	2	2
MGP_NZOHlLtJ_P0064980	DUF1897	PF09005.10	2.5e-11	1	2
MGP_NZOHlLtJ_P0064980	DUF1897	PF09005.10	2.5e-11	2	2
MGP_NZOHlLtJ_P0064986	DUF1897	PF09005.10	2.5e-11	1	2
MGP_NZOHlLtJ_P0064986	DUF1897	PF09005.10	2.5e-11	2	2
MGP_NZOHlLtJ_P0064984	DUF1897	PF09005.10	2.6e-11	1	2
MGP_NZOHlLtJ_P0064984	DUF1897	PF09005.10	2.6e-11	2	2
MGP_NZOHlLtJ_P0064982	DUF1897	PF09005.10	2.6e-11	1	2
MGP_NZOHlLtJ_P0064982	DUF1897	PF09005.10	2.6e-11	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0064989	-	432	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0064988	-	4525	-	MGP_NZOHlLtJ_P0064988	642 (aa)	-	-
MGP_NZOHlLtJ_T0064998	-	665	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0064991	-	512	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0064996	-	424	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0064981	-	1040	-	MGP_NZOHlLtJ_P0064981	306 (aa)	-	-
MGP_NZOHlLtJ_T0064980	-	6523	XM_006501660	MGP_NZOHlLtJ_P0064980	642 (aa)	XP_006501723	Q91WJ8
MGP_NZOHlLtJ_T0064983	-	3163	-	MGP_NZOHlLtJ_P0064983	523 (aa)	-	-
MGP_NZOHlLtJ_T0064982	-	2552	-	MGP_NZOHlLtJ_P0064982	654 (aa)	-	-
MGP_NZOHlLtJ_T0064985	-	2091	-	MGP_NZOHlLtJ_P0064985	69 (aa)	-	-
MGP_NZOHlLtJ_T0064984	-	2526	-	MGP_NZOHlLtJ_P0064984	651 (aa)	-	-
MGP_NZOHlLtJ_T0064987	-	4846	-	MGP_NZOHlLtJ_P0064987	700 (aa)	-	-
MGP_NZOHlLtJ_T0064986	-	2374	-	MGP_NZOHlLtJ_P0064986	643 (aa)	-	-
MGP_NZOHlLtJ_T0064992	-	796	-	MGP_NZOHlLtJ_P0064992	141 (aa)	-	-
MGP_NZOHlLtJ_T0064997	-	4006	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0064994	-	809	-	MGP_NZOHlLtJ_P0064994	156 (aa)	-	-
MGP_NZOHlLtJ_T0064993	-	800	-	MGP_NZOHlLtJ_P0064993	173 (aa)	-	-
MGP_NZOHlLtJ_T0064995	-	5099	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0064990	-	585	-	MGP_NZOHlLtJ_P0064990	149 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0028461's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0028461's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0028461	Fubp1	61	36.765	MGP_NZOHlLtJ_G0032224	Nova2	54	36.765
MGP_NZOHlLtJ_G0028461	Fubp1	69	30.168	MGP_NZOHlLtJ_G0032223	-	53	36.765
MGP_NZOHlLtJ_G0028461	Fubp1	53	34.615	MGP_NZOHlLtJ_G0021060	Hnrnpk	57	34.615
MGP_NZOHlLtJ_G0028461	Fubp1	96	64.410	MGP_NZOHlLtJ_G0024398	Khsrp	70	67.654
MGP_NZOHlLtJ_G0028461	Fubp1	50	36.364	MGP_NZOHlLtJ_G0020143	Nova1	57	36.364
MGP_NZOHlLtJ_G0028461	Fubp1	94	59.208	MGP_NZOHlLtJ_G0026063	Fubp3	96	64.324
MGP_NZOHlLtJ_G0028461	Fubp1	72	34.524	MGP_NZOHlLtJ_G0035746	-	76	33.684
MGP_NZOHlLtJ_G0028461	Fubp1	72	33.019	MGP_NZOHlLtJ_G0017824	Pcbp3	66	31.250