EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0028534 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 5530 bases
Position: chr4:8784804-8790333
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0065407	RRM_5	PF13893.6	2.8e-08	1	1
MGP_NZOHlLtJ_P0065407	RRM_1	PF00076.22	1e-84	1	4
MGP_NZOHlLtJ_P0065407	RRM_1	PF00076.22	1e-84	2	4
MGP_NZOHlLtJ_P0065407	RRM_1	PF00076.22	1e-84	3	4
MGP_NZOHlLtJ_P0065407	RRM_1	PF00076.22	1e-84	4	4

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0065407	-	1641	-	MGP_NZOHlLtJ_P0065407	509 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0028534's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0028534's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0028534	-	55	36.782	MGP_NZOHlLtJ_G0028026	Celf3	67	32.407
MGP_NZOHlLtJ_G0028534	-	75	66.396	MGP_NZOHlLtJ_G0027667	Pabpc4l	99	66.396
MGP_NZOHlLtJ_G0028534	-	73	61.667	MGP_NZOHlLtJ_G0036568	Pabpc5	95	61.580
MGP_NZOHlLtJ_G0028534	-	96	61.382	MGP_NZOHlLtJ_G0027313	Pabpc1l	78	61.382
MGP_NZOHlLtJ_G0028534	-	74	32.895	MGP_NZOHlLtJ_G0033843	Elavl1	95	32.895
MGP_NZOHlLtJ_G0028534	-	93	77.311	MGP_NZOHlLtJ_G0022226	Pabpc1	74	77.311
MGP_NZOHlLtJ_G0028534	-	93	68.041	MGP_NZOHlLtJ_G0023576	Pabpc6	74	68.041
MGP_NZOHlLtJ_G0028534	-	98	93.400	MGP_NZOHlLtJ_G0029200	Pabpc4	100	95.238
MGP_NZOHlLtJ_G0028534	-	74	30.921	MGP_NZOHlLtJ_G0028903	Elavl2	89	30.921
MGP_NZOHlLtJ_G0028534	-	75	30.000	MGP_NZOHlLtJ_G0029034	Elavl4	90	30.000
MGP_NZOHlLtJ_G0028534	-	75	37.500	MGP_NZOHlLtJ_G0024664	Celf4	59	33.028
MGP_NZOHlLtJ_G0028534	-	72	31.250	MGP_NZOHlLtJ_G0033595	Tial1	91	32.099
MGP_NZOHlLtJ_G0028534	-	72	38.095	MGP_NZOHlLtJ_G0031438	Tia1	87	38.095
MGP_NZOHlLtJ_G0028534	-	96	68.712	MGP_NZOHlLtJ_G0024827	Pabpc2	76	68.712
MGP_NZOHlLtJ_G0028534	-	61	37.113	MGP_NZOHlLtJ_G0035416	Celf6	62	37.113
MGP_NZOHlLtJ_G0028534	-	62	37.500	MGP_NZOHlLtJ_G0025805	Celf2	57	37.500