EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NZOHlLtJ_G0028611 (Gene tree)
Gene ID
-
Gene Symbol
Ddx58
Alias
6430573D20Rik|C330021E21|RIG-I|RLR-1
Full Name
DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
Gene Type
protein_coding
Species
Mus_musculus_nzohlltj
Status
putative
Strand
Minus strand
Length
41386 bases
Position
chr4:37659329-37700714
Accession
2442858
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NZOHlLtJ_P0065707ResIIIPF04851.153.3e-1711
MGP_NZOHlLtJ_P0065704ResIIIPF04851.155.5e-1711
MGP_NZOHlLtJ_P0065704RIG-I_C-RDPF11648.84.9e-3511
MGP_NZOHlLtJ_P0065707DEADPF00270.291.3e-1611
MGP_NZOHlLtJ_P0065704DEADPF00270.292.8e-1611
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NZOHlLtJ_T0065711-1607--- (aa)--
MGP_NZOHlLtJ_T0065710-541--- (aa)--
MGP_NZOHlLtJ_T0065702-386--- (aa)--
MGP_NZOHlLtJ_T0065703-3533--- (aa)--
MGP_NZOHlLtJ_T0065704-3874-MGP_NZOHlLtJ_P0065704926 (aa)--
MGP_NZOHlLtJ_T0065705-422--- (aa)--
MGP_NZOHlLtJ_T0065706-756--- (aa)--
MGP_NZOHlLtJ_T0065707-2127-MGP_NZOHlLtJ_P0065707707 (aa)--
MGP_NZOHlLtJ_T0065708-1641--- (aa)--
MGP_NZOHlLtJ_T0065709-1250--- (aa)--
Gene Model
Click here to download MGP_NZOHlLtJ_G0028611's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0028611's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NZOHlLtJ_G0028611Ddx589830.691MGP_NZOHlLtJ_G0026247Ifih19730.691
MGP_NZOHlLtJ_G0028611Ddx587235.010MGP_NZOHlLtJ_G0019593Dhx589732.468

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us