EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0028903 (Gene tree)
Gene ID: -
Gene Symbol: Elavl2
Alias: Hub|mel-N1
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 2 (Hu antigen B)
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 163686 bases
Position: chr4:90375239-90538924
Accession: 1100887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0066944	RRM_5	PF13893.6	1.3e-12	1	2
MGP_NZOHlLtJ_P0066944	RRM_5	PF13893.6	1.3e-12	2	2
MGP_NZOHlLtJ_P0066945	RRM_5	PF13893.6	1.5e-12	1	2
MGP_NZOHlLtJ_P0066945	RRM_5	PF13893.6	1.5e-12	2	2
MGP_NZOHlLtJ_P0066942	RRM_5	PF13893.6	1.8e-12	1	2
MGP_NZOHlLtJ_P0066942	RRM_5	PF13893.6	1.8e-12	2	2
MGP_NZOHlLtJ_P0066943	RRM_5	PF13893.6	1.9e-12	1	2
MGP_NZOHlLtJ_P0066943	RRM_5	PF13893.6	1.9e-12	2	2
MGP_NZOHlLtJ_P0066947	RRM_5	PF13893.6	2.2e-12	1	2
MGP_NZOHlLtJ_P0066947	RRM_5	PF13893.6	2.2e-12	2	2
MGP_NZOHlLtJ_P0066948	RRM_5	PF13893.6	2.2e-12	1	2
MGP_NZOHlLtJ_P0066948	RRM_5	PF13893.6	2.2e-12	2	2
MGP_NZOHlLtJ_P0066944	RRM_1	PF00076.22	1.2e-66	1	3
MGP_NZOHlLtJ_P0066944	RRM_1	PF00076.22	1.2e-66	2	3
MGP_NZOHlLtJ_P0066944	RRM_1	PF00076.22	1.2e-66	3	3
MGP_NZOHlLtJ_P0066945	RRM_1	PF00076.22	1.4e-66	1	3
MGP_NZOHlLtJ_P0066945	RRM_1	PF00076.22	1.4e-66	2	3
MGP_NZOHlLtJ_P0066945	RRM_1	PF00076.22	1.4e-66	3	3
MGP_NZOHlLtJ_P0066942	RRM_1	PF00076.22	1.6e-66	1	3
MGP_NZOHlLtJ_P0066942	RRM_1	PF00076.22	1.6e-66	2	3
MGP_NZOHlLtJ_P0066942	RRM_1	PF00076.22	1.6e-66	3	3
MGP_NZOHlLtJ_P0066943	RRM_1	PF00076.22	1.7e-66	1	3
MGP_NZOHlLtJ_P0066943	RRM_1	PF00076.22	1.7e-66	2	3
MGP_NZOHlLtJ_P0066943	RRM_1	PF00076.22	1.7e-66	3	3
MGP_NZOHlLtJ_P0066948	RRM_1	PF00076.22	2e-66	1	3
MGP_NZOHlLtJ_P0066948	RRM_1	PF00076.22	2e-66	2	3
MGP_NZOHlLtJ_P0066948	RRM_1	PF00076.22	2e-66	3	3
MGP_NZOHlLtJ_P0066947	RRM_1	PF00076.22	2e-66	1	3
MGP_NZOHlLtJ_P0066947	RRM_1	PF00076.22	2e-66	2	3
MGP_NZOHlLtJ_P0066947	RRM_1	PF00076.22	2e-66	3	3
MGP_NZOHlLtJ_P0066950	RRM_1	PF00076.22	7.3e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0066953	-	450	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0066954	-	415	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0066949	-	3195	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0066948	-	1167	-	MGP_NZOHlLtJ_P0066948	388 (aa)	-	-
MGP_NZOHlLtJ_T0066947	-	1282	-	MGP_NZOHlLtJ_P0066947	389 (aa)	-	-
MGP_NZOHlLtJ_T0066946	-	930	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0066945	-	3730	-	MGP_NZOHlLtJ_P0066945	360 (aa)	-	-
MGP_NZOHlLtJ_T0066944	-	3671	-	MGP_NZOHlLtJ_P0066944	347 (aa)	-	-
MGP_NZOHlLtJ_T0066943	-	3797	-	MGP_NZOHlLtJ_P0066943	376 (aa)	-	-
MGP_NZOHlLtJ_T0066942	-	3840	XM_006502778	MGP_NZOHlLtJ_P0066942	373 (aa)	XP_006502841	Q60899
MGP_NZOHlLtJ_T0066950	-	425	-	MGP_NZOHlLtJ_P0066950	125 (aa)	-	-
MGP_NZOHlLtJ_T0066951	-	408	-	MGP_NZOHlLtJ_P0066951	83 (aa)	-	-
MGP_NZOHlLtJ_T0066952	-	511	-	MGP_NZOHlLtJ_P0066952	23 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0028903's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0028903's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0028903	Elavl2	100	79.292	MGP_NZOHlLtJ_G0034984	Elavl3	100	78.400
MGP_NZOHlLtJ_G0028903	Elavl2	92	34.940	MGP_NZOHlLtJ_G0027313	Pabpc1l	64	34.940
MGP_NZOHlLtJ_G0028903	Elavl2	89	76.375	MGP_NZOHlLtJ_G0033843	Elavl1	94	76.375
MGP_NZOHlLtJ_G0028903	Elavl2	73	34.831	MGP_NZOHlLtJ_G0036263	Rbmx	86	34.831
MGP_NZOHlLtJ_G0028903	Elavl2	72	32.632	MGP_NZOHlLtJ_G0019357	Msi2	70	31.250
MGP_NZOHlLtJ_G0028903	Elavl2	89	30.921	MGP_NZOHlLtJ_G0028534	-	74	30.921
MGP_NZOHlLtJ_G0028903	Elavl2	97	30.857	MGP_NZOHlLtJ_G0017995	Celf5	97	30.857
MGP_NZOHlLtJ_G0028903	Elavl2	58	31.169	MGP_NZOHlLtJ_G0030244	Hnrnpd	70	32.000
MGP_NZOHlLtJ_G0028903	Elavl2	64	37.500	MGP_NZOHlLtJ_G0017921	Cirbp	76	37.500
MGP_NZOHlLtJ_G0028903	Elavl2	96	34.615	MGP_NZOHlLtJ_G0031438	Tia1	89	34.615
MGP_NZOHlLtJ_G0028903	Elavl2	100	89.751	MGP_NZOHlLtJ_G0029034	Elavl4	99	89.315
MGP_NZOHlLtJ_G0028903	Elavl2	89	37.349	MGP_NZOHlLtJ_G0022226	Pabpc1	58	37.349
MGP_NZOHlLtJ_G0028903	Elavl2	83	39.506	MGP_NZOHlLtJ_G0025805	Celf2	87	33.333
MGP_NZOHlLtJ_G0028903	Elavl2	85	41.975	MGP_NZOHlLtJ_G0026612	Celf1	69	41.975
MGP_NZOHlLtJ_G0028903	Elavl2	78	40.741	MGP_NZOHlLtJ_G0035416	Celf6	89	37.037
MGP_NZOHlLtJ_G0028903	Elavl2	89	37.037	MGP_NZOHlLtJ_G0036568	Pabpc5	94	37.037
MGP_NZOHlLtJ_G0028903	Elavl2	69	37.209	MGP_NZOHlLtJ_G0035919	Rbms3	83	37.222
MGP_NZOHlLtJ_G0028903	Elavl2	66	30.952	MGP_NZOHlLtJ_G0029330	Trnau1ap	98	30.952
MGP_NZOHlLtJ_G0028903	Elavl2	63	32.911	MGP_NZOHlLtJ_G0036057	Rbm3	82	38.710
MGP_NZOHlLtJ_G0028903	Elavl2	93	34.615	MGP_NZOHlLtJ_G0033595	Tial1	72	34.615
MGP_NZOHlLtJ_G0028903	Elavl2	59	33.784	MGP_NZOHlLtJ_G0028096	Rbm8a	58	32.353
MGP_NZOHlLtJ_G0028903	Elavl2	89	34.940	MGP_NZOHlLtJ_G0029200	Pabpc4	93	31.579
MGP_NZOHlLtJ_G0028903	Elavl2	89	36.145	MGP_NZOHlLtJ_G0024827	Pabpc2	59	36.145
MGP_NZOHlLtJ_G0028903	Elavl2	88	39.506	MGP_NZOHlLtJ_G0024664	Celf4	91	37.037
MGP_NZOHlLtJ_G0028903	Elavl2	76	41.975	MGP_NZOHlLtJ_G0028026	Celf3	63	41.975
MGP_NZOHlLtJ_G0028903	Elavl2	59	33.784	MGP_NZOHlLtJ_G0017281	Rbm8a2	58	32.353
MGP_NZOHlLtJ_G0028903	Elavl2	67	35.714	MGP_NZOHlLtJ_G0030567	Snrnp35	60	37.500
MGP_NZOHlLtJ_G0028903	Elavl2	89	34.940	MGP_NZOHlLtJ_G0027667	Pabpc4l	96	34.940
MGP_NZOHlLtJ_G0028903	Elavl2	90	37.349	MGP_NZOHlLtJ_G0023576	Pabpc6	60	37.349