EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0029026 (Gene tree)
Gene ID: -
Gene Symbol: Calr4
Alias: 4933403L16Rik|AU017583
Full Name: calreticulin 4
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 39492 bases
Position: chr4:108911191-108950682
Accession: 2140435
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0067550	Calreticulin	PF00262.18	6.4e-76	1	2
MGP_NZOHlLtJ_P0067550	Calreticulin	PF00262.18	6.4e-76	2	2
MGP_NZOHlLtJ_P0067552	Calreticulin	PF00262.18	1.2e-74	1	2
MGP_NZOHlLtJ_P0067552	Calreticulin	PF00262.18	1.2e-74	2	2
MGP_NZOHlLtJ_P0067551	Calreticulin	PF00262.18	7e-52	1	2
MGP_NZOHlLtJ_P0067551	Calreticulin	PF00262.18	7e-52	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0067553	-	532	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0067552	-	1606	-	MGP_NZOHlLtJ_P0067552	420 (aa)	-	-
MGP_NZOHlLtJ_T0067551	-	1583	-	MGP_NZOHlLtJ_P0067551	313 (aa)	-	-
MGP_NZOHlLtJ_T0067550	-	1320	XM_006502653	MGP_NZOHlLtJ_P0067550	439 (aa)	XP_006502718	A2A8Z3

Gene Model

Click here to download MGP_NZOHlLtJ_G0029026's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0029026's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0029026	Calr4	77	35.000	MGP_NZOHlLtJ_G0034344	Clgn	65	34.500
MGP_NZOHlLtJ_G0029026	Calr4	80	40.400	MGP_NZOHlLtJ_G0034294	Calr3	82	50.909
MGP_NZOHlLtJ_G0029026	Calr4	78	66.869	MGP_NZOHlLtJ_G0034386	Calr	82	66.181
MGP_NZOHlLtJ_G0029026	Calr4	78	36.790	MGP_NZOHlLtJ_G0018680	Canx	68	37.037