EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0029034 (Gene tree)
Gene ID: -
Gene Symbol: Elavl4
Alias: Elav|Hud|PNEM
Full Name: ELAV (embryonic lethal%2C abnormal vision%2C Drosophila)-like 4 (Hu antigen D)
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 156492 bases
Position: chr4:109911926-110068417
Accession: 107427
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0067588	RRM_5	PF13893.6	2.9e-13	1	2
MGP_NZOHlLtJ_P0067588	RRM_5	PF13893.6	2.9e-13	2	2
MGP_NZOHlLtJ_P0067584	RRM_5	PF13893.6	3.1e-13	1	2
MGP_NZOHlLtJ_P0067584	RRM_5	PF13893.6	3.1e-13	2	2
MGP_NZOHlLtJ_P0067589	RRM_5	PF13893.6	3.2e-13	1	2
MGP_NZOHlLtJ_P0067589	RRM_5	PF13893.6	3.2e-13	2	2
MGP_NZOHlLtJ_P0067587	RRM_5	PF13893.6	3.5e-13	1	2
MGP_NZOHlLtJ_P0067587	RRM_5	PF13893.6	3.5e-13	2	2
MGP_NZOHlLtJ_P0067590	RRM_5	PF13893.6	3.6e-13	1	2
MGP_NZOHlLtJ_P0067590	RRM_5	PF13893.6	3.6e-13	2	2
MGP_NZOHlLtJ_P0067586	RRM_5	PF13893.6	4e-13	1	2
MGP_NZOHlLtJ_P0067586	RRM_5	PF13893.6	4e-13	2	2
MGP_NZOHlLtJ_P0067585	RRM_5	PF13893.6	4e-13	1	2
MGP_NZOHlLtJ_P0067585	RRM_5	PF13893.6	4e-13	2	2
MGP_NZOHlLtJ_P0067588	RRM_1	PF00076.22	2.1e-65	1	3
MGP_NZOHlLtJ_P0067588	RRM_1	PF00076.22	2.1e-65	2	3
MGP_NZOHlLtJ_P0067588	RRM_1	PF00076.22	2.1e-65	3	3
MGP_NZOHlLtJ_P0067589	RRM_1	PF00076.22	2.4e-65	1	3
MGP_NZOHlLtJ_P0067589	RRM_1	PF00076.22	2.4e-65	2	3
MGP_NZOHlLtJ_P0067589	RRM_1	PF00076.22	2.4e-65	3	3
MGP_NZOHlLtJ_P0067584	RRM_1	PF00076.22	2.4e-65	1	3
MGP_NZOHlLtJ_P0067584	RRM_1	PF00076.22	2.4e-65	2	3
MGP_NZOHlLtJ_P0067584	RRM_1	PF00076.22	2.4e-65	3	3
MGP_NZOHlLtJ_P0067587	RRM_1	PF00076.22	2.5e-65	1	3
MGP_NZOHlLtJ_P0067587	RRM_1	PF00076.22	2.5e-65	2	3
MGP_NZOHlLtJ_P0067587	RRM_1	PF00076.22	2.5e-65	3	3
MGP_NZOHlLtJ_P0067590	RRM_1	PF00076.22	2.9e-65	1	3
MGP_NZOHlLtJ_P0067590	RRM_1	PF00076.22	2.9e-65	2	3
MGP_NZOHlLtJ_P0067590	RRM_1	PF00076.22	2.9e-65	3	3
MGP_NZOHlLtJ_P0067586	RRM_1	PF00076.22	3e-65	1	3
MGP_NZOHlLtJ_P0067586	RRM_1	PF00076.22	3e-65	2	3
MGP_NZOHlLtJ_P0067586	RRM_1	PF00076.22	3e-65	3	3
MGP_NZOHlLtJ_P0067585	RRM_1	PF00076.22	3e-65	1	3
MGP_NZOHlLtJ_P0067585	RRM_1	PF00076.22	3e-65	2	3
MGP_NZOHlLtJ_P0067585	RRM_1	PF00076.22	3e-65	3	3
MGP_NZOHlLtJ_P0067592	RRM_1	PF00076.22	1.2e-20	1	1
MGP_NZOHlLtJ_P0067594	RRM_1	PF00076.22	6.9e-13	1	1
MGP_NZOHlLtJ_P0067595	RRM_1	PF00076.22	9.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0067584	-	3997	XM_006502793	MGP_NZOHlLtJ_P0067584	366 (aa)	XP_006502856	Q61701
MGP_NZOHlLtJ_T0067585	-	4149	-	MGP_NZOHlLtJ_P0067585	385 (aa)	-	-
MGP_NZOHlLtJ_T0067586	-	3799	-	MGP_NZOHlLtJ_P0067586	383 (aa)	-	-
MGP_NZOHlLtJ_T0067587	-	4107	-	MGP_NZOHlLtJ_P0067587	371 (aa)	-	-
MGP_NZOHlLtJ_T0067588	-	3761	-	MGP_NZOHlLtJ_P0067588	356 (aa)	-	-
MGP_NZOHlLtJ_T0067589	-	3775	-	MGP_NZOHlLtJ_P0067589	366 (aa)	-	-
MGP_NZOHlLtJ_T0067593	-	464	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0067592	-	644	-	MGP_NZOHlLtJ_P0067592	137 (aa)	-	-
MGP_NZOHlLtJ_T0067591	-	869	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0067590	-	4024	-	MGP_NZOHlLtJ_P0067590	380 (aa)	-	-
MGP_NZOHlLtJ_T0067595	-	488	-	MGP_NZOHlLtJ_P0067595	92 (aa)	-	-
MGP_NZOHlLtJ_T0067594	-	663	-	MGP_NZOHlLtJ_P0067594	94 (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0029034's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0029034's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0029034	Elavl4	88	38.272	MGP_NZOHlLtJ_G0024664	Celf4	91	35.802
MGP_NZOHlLtJ_G0029034	Elavl4	72	35.821	MGP_NZOHlLtJ_G0031187	Tra2a	59	37.097
MGP_NZOHlLtJ_G0029034	Elavl4	70	35.484	MGP_NZOHlLtJ_G0027667	Pabpc4l	96	30.065
MGP_NZOHlLtJ_G0029034	Elavl4	81	38.272	MGP_NZOHlLtJ_G0025805	Celf2	61	38.272
MGP_NZOHlLtJ_G0029034	Elavl4	57	37.037	MGP_NZOHlLtJ_G0030567	Snrnp35	59	33.803
MGP_NZOHlLtJ_G0029034	Elavl4	70	36.458	MGP_NZOHlLtJ_G0026239	Rbms1	53	32.773
MGP_NZOHlLtJ_G0029034	Elavl4	70	36.458	MGP_NZOHlLtJ_G0035919	Rbms3	83	37.097
MGP_NZOHlLtJ_G0029034	Elavl4	78	30.088	MGP_NZOHlLtJ_G0019357	Msi2	84	30.208
MGP_NZOHlLtJ_G0029034	Elavl4	54	33.784	MGP_NZOHlLtJ_G0017281	Rbm8a2	61	31.683
MGP_NZOHlLtJ_G0029034	Elavl4	74	33.708	MGP_NZOHlLtJ_G0036263	Rbmx	86	33.708
MGP_NZOHlLtJ_G0029034	Elavl4	58	31.646	MGP_NZOHlLtJ_G0036057	Rbm3	82	38.710
MGP_NZOHlLtJ_G0029034	Elavl4	99	89.315	MGP_NZOHlLtJ_G0028903	Elavl2	100	89.751
MGP_NZOHlLtJ_G0029034	Elavl4	88	32.468	MGP_NZOHlLtJ_G0023576	Pabpc6	60	32.468
MGP_NZOHlLtJ_G0029034	Elavl4	90	30.625	MGP_NZOHlLtJ_G0029200	Pabpc4	98	30.625
MGP_NZOHlLtJ_G0029034	Elavl4	94	35.897	MGP_NZOHlLtJ_G0031438	Tia1	98	32.895
MGP_NZOHlLtJ_G0029034	Elavl4	88	34.940	MGP_NZOHlLtJ_G0024827	Pabpc2	59	34.940
MGP_NZOHlLtJ_G0029034	Elavl4	85	40.741	MGP_NZOHlLtJ_G0028026	Celf3	61	40.741
MGP_NZOHlLtJ_G0029034	Elavl4	88	36.145	MGP_NZOHlLtJ_G0022226	Pabpc1	58	36.145
MGP_NZOHlLtJ_G0029034	Elavl4	78	40.741	MGP_NZOHlLtJ_G0026612	Celf1	62	40.741
MGP_NZOHlLtJ_G0029034	Elavl4	89	33.735	MGP_NZOHlLtJ_G0027313	Pabpc1l	62	33.735
MGP_NZOHlLtJ_G0029034	Elavl4	74	37.500	MGP_NZOHlLtJ_G0017995	Celf5	89	30.120
MGP_NZOHlLtJ_G0029034	Elavl4	89	73.585	MGP_NZOHlLtJ_G0033843	Elavl1	98	73.585
MGP_NZOHlLtJ_G0029034	Elavl4	85	40.741	MGP_NZOHlLtJ_G0035416	Celf6	95	35.802
MGP_NZOHlLtJ_G0029034	Elavl4	99	79.893	MGP_NZOHlLtJ_G0034984	Elavl3	99	80.323
MGP_NZOHlLtJ_G0029034	Elavl4	54	33.784	MGP_NZOHlLtJ_G0028096	Rbm8a	62	30.693
MGP_NZOHlLtJ_G0029034	Elavl4	90	30.000	MGP_NZOHlLtJ_G0028534	-	75	30.000
MGP_NZOHlLtJ_G0029034	Elavl4	88	35.897	MGP_NZOHlLtJ_G0033595	Tial1	73	35.897
MGP_NZOHlLtJ_G0029034	Elavl4	70	38.889	MGP_NZOHlLtJ_G0017921	Cirbp	84	38.889
MGP_NZOHlLtJ_G0029034	Elavl4	66	42.373	MGP_NZOHlLtJ_G0017927	Dazap1	64	30.275