EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NZOHlLtJ_G0029330 (Gene tree)
Gene ID
-
Gene Symbol
Trnau1ap
Alias
1110007F05Rik|AA387999|SECp43|Secp43|Trspap1|WI1-2643G14.2
Full Name
tRNA selenocysteine 1 associated protein 1
Gene Type
protein_coding
Species
Mus_musculus_nzohlltj
Status
putative
Strand
Minus strand
Length
17623 bases
Position
chr4:132891576-132909198
Accession
1919037
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NZOHlLtJ_P0068893RRM_1PF00076.229.9e-2712
MGP_NZOHlLtJ_P0068893RRM_1PF00076.229.9e-2722
MGP_NZOHlLtJ_P0068892RRM_1PF00076.223.3e-1711
MGP_NZOHlLtJ_P0068897RRM_1PF00076.221.7e-1111
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NZOHlLtJ_T0068901-679--- (aa)--
MGP_NZOHlLtJ_T0068900-663-MGP_NZOHlLtJ_P006890049 (aa)--
MGP_NZOHlLtJ_T0068903-621--- (aa)--
MGP_NZOHlLtJ_T0068902-371-MGP_NZOHlLtJ_P006890270 (aa)--
MGP_NZOHlLtJ_T0068899-553--- (aa)--
MGP_NZOHlLtJ_T0068898-600-MGP_NZOHlLtJ_P006889847 (aa)--
MGP_NZOHlLtJ_T0068893-1130-MGP_NZOHlLtJ_P0068893287 (aa)--
MGP_NZOHlLtJ_T0068892-961XM_011250332MGP_NZOHlLtJ_P0068892247 (aa)XP_011248634Q80VC6
MGP_NZOHlLtJ_T0068897-474-MGP_NZOHlLtJ_P0068897146 (aa)--
MGP_NZOHlLtJ_T0068896-1017-MGP_NZOHlLtJ_P006889686 (aa)--
MGP_NZOHlLtJ_T0068895-650--- (aa)--
MGP_NZOHlLtJ_T0068894-1791--- (aa)--
Gene Model
Click here to download MGP_NZOHlLtJ_G0029330's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0029330's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NZOHlLtJ_G0029330Trnau1ap7930.198MGP_NZOHlLtJ_G0031438Tia16031.285
MGP_NZOHlLtJ_G0029330Trnau1ap9830.952MGP_NZOHlLtJ_G0028903Elavl26630.952
MGP_NZOHlLtJ_G0029330Trnau1ap6032.386MGP_NZOHlLtJ_G0033595Tial17333.019
MGP_NZOHlLtJ_G0029330Trnau1ap8834.211MGP_NZOHlLtJ_G0027667Pabpc4l8931.875

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