EuRBPDB

Description

Ensembl ID: MGP_NZOHlLtJ_G0029427 (Gene tree)
Gene ID: -
Gene Symbol: Hnrnpr
Alias: 2610003J05Rik|2610528B01Rik|Hnrpr|Hnrpr {ECO:0000313|EMBL:AAH38051.1,GN ECO:0000313|MGI:MGI:1891692}|hnRNPR
Full Name: heterogeneous nuclear ribonucleoprotein R
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 53214 bases
Position: chr4:137247051-137300264
Accession: 1891692
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0069333	RRM_1	PF00076.22	2e-43	1	3
MGP_NZOHlLtJ_P0069333	RRM_1	PF00076.22	2e-43	2	3
MGP_NZOHlLtJ_P0069333	RRM_1	PF00076.22	2e-43	3	3
MGP_NZOHlLtJ_P0069336	RRM_1	PF00076.22	5.7e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0069333	-	20846	XM_006539221	MGP_NZOHlLtJ_P0069333	555 (aa)	XP_006539284	A2AW40
MGP_NZOHlLtJ_T0069335	-	576	-	MGP_NZOHlLtJ_P0069335	72 (aa)	-	-
MGP_NZOHlLtJ_T0069334	-	859	-	MGP_NZOHlLtJ_P0069334	103 (aa)	-	-
MGP_NZOHlLtJ_T0069337	-	292	-	MGP_NZOHlLtJ_P0069337	73 (aa)	-	-
MGP_NZOHlLtJ_T0069336	-	980	-	MGP_NZOHlLtJ_P0069336	270 (aa)	-	-
MGP_NZOHlLtJ_T0069339	-	3346	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0069338	-	474	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0069340	-	1918	-	-	- (aa)	-	-

Gene Model

Protein-Protein Interaction (PPI)

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0029427	Hnrnpr	59	56.329	MGP_NZOHlLtJ_G0027806	Rbm46	65	56.774
MGP_NZOHlLtJ_G0029427	Hnrnpr	54	57.823	MGP_NZOHlLtJ_G0025509	A1cf	52	53.896
MGP_NZOHlLtJ_G0029427	Hnrnpr	72	48.642	MGP_NZOHlLtJ_G0030051	Rbm47	88	59.859
MGP_NZOHlLtJ_G0029427	Hnrnpr	99	86.538	MGP_NZOHlLtJ_G0035622	Syncrip	97	78.843
MGP_NZOHlLtJ_G0029427	Hnrnpr	57	37.908	MGP_NZOHlLtJ_G0024746	Dnd1	62	33.040