EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0029511 (Gene tree)
Gene ID: -
Gene Symbol: Zbtb17
Alias: AA589413|Lp-1|Miz1|Zfp100|Znf151|mZ13
Full Name: zinc finger and BTB domain containing 17
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 23023 bases
Position: chr4:142740983-142764005
Accession: 107410
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0069676	zf-C2H2	PF00096.26	2.8e-60	1	10
MGP_NZOHlLtJ_P0069676	zf-C2H2	PF00096.26	2.8e-60	2	10
MGP_NZOHlLtJ_P0069676	zf-C2H2	PF00096.26	2.8e-60	3	10
MGP_NZOHlLtJ_P0069676	zf-C2H2	PF00096.26	2.8e-60	4	10
MGP_NZOHlLtJ_P0069676	zf-C2H2	PF00096.26	2.8e-60	5	10
MGP_NZOHlLtJ_P0069676	zf-C2H2	PF00096.26	2.8e-60	6	10
MGP_NZOHlLtJ_P0069676	zf-C2H2	PF00096.26	2.8e-60	7	10
MGP_NZOHlLtJ_P0069676	zf-C2H2	PF00096.26	2.8e-60	8	10
MGP_NZOHlLtJ_P0069676	zf-C2H2	PF00096.26	2.8e-60	9	10
MGP_NZOHlLtJ_P0069676	zf-C2H2	PF00096.26	2.8e-60	10	10
MGP_NZOHlLtJ_P0069676	zf-met	PF12874.7	2.6e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0069676	-	2722	XM_006538727	MGP_NZOHlLtJ_P0069676	794 (aa)	XP_006538790	Q60821
MGP_NZOHlLtJ_T0069677	-	3478	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0069678	-	2973	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0069679	-	337	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0069681	-	771	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0069680	-	785	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0069682	-	867	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0029511's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0029511's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0029511	Zbtb17	62	42.810	MGP_NZOHlLtJ_G0018696	Zfp354a	72	44.444
MGP_NZOHlLtJ_G0029511	Zbtb17	56	41.606	MGP_NZOHlLtJ_G0021128	Rslcan18	66	41.600
MGP_NZOHlLtJ_G0029511	Zbtb17	58	41.141	MGP_NZOHlLtJ_G0021129	Zfp759	86	41.141
MGP_NZOHlLtJ_G0029511	Zbtb17	58	43.544	MGP_NZOHlLtJ_G0032301	Zfp108	67	43.544
MGP_NZOHlLtJ_G0029511	Zbtb17	56	44.086	MGP_NZOHlLtJ_G0032303	Zfp94	76	44.086
MGP_NZOHlLtJ_G0029511	Zbtb17	55	43.322	MGP_NZOHlLtJ_G0018688	Zfp454	65	42.424
MGP_NZOHlLtJ_G0029511	Zbtb17	79	38.433	MGP_NZOHlLtJ_G0032405	Zfp974	88	38.433
MGP_NZOHlLtJ_G0029511	Zbtb17	59	46.746	MGP_NZOHlLtJ_G0032299	Zfp111	72	46.746
MGP_NZOHlLtJ_G0029511	Zbtb17	61	43.939	MGP_NZOHlLtJ_G0032296	Zfp112	61	43.939
MGP_NZOHlLtJ_G0029511	Zbtb17	59	36.986	MGP_NZOHlLtJ_G0018784	Zfp672	90	40.000
MGP_NZOHlLtJ_G0029511	Zbtb17	62	50.909	MGP_NZOHlLtJ_G0029971	Zbtb49	62	67.742
MGP_NZOHlLtJ_G0029511	Zbtb17	78	39.568	MGP_NZOHlLtJ_G0027086	Gzf1	83	37.118
MGP_NZOHlLtJ_G0029511	Zbtb17	58	42.606	MGP_NZOHlLtJ_G0032611	Zfp715	68	39.314
MGP_NZOHlLtJ_G0029511	Zbtb17	69	38.325	MGP_NZOHlLtJ_G0021145	Zfp748	91	43.931
MGP_NZOHlLtJ_G0029511	Zbtb17	58	40.968	MGP_NZOHlLtJ_G0034279	Zfp882	85	42.985
MGP_NZOHlLtJ_G0029511	Zbtb17	58	42.857	MGP_NZOHlLtJ_G0033545	Zfp768	52	42.231
MGP_NZOHlLtJ_G0029511	Zbtb17	58	39.744	MGP_NZOHlLtJ_G0033547	-	59	39.744
MGP_NZOHlLtJ_G0029511	Zbtb17	63	38.614	MGP_NZOHlLtJ_G0031165	Repin1	93	38.614
MGP_NZOHlLtJ_G0029511	Zbtb17	55	41.083	MGP_NZOHlLtJ_G0018832	Zfp867	81	41.083
MGP_NZOHlLtJ_G0029511	Zbtb17	72	34.627	MGP_NZOHlLtJ_G0023705	Zscan10	78	43.165
MGP_NZOHlLtJ_G0029511	Zbtb17	79	31.183	MGP_NZOHlLtJ_G0021399	Zfp131	72	32.955
MGP_NZOHlLtJ_G0029511	Zbtb17	63	42.606	MGP_NZOHlLtJ_G0023677	Zfp51	82	42.183
MGP_NZOHlLtJ_G0029511	Zbtb17	64	42.899	MGP_NZOHlLtJ_G0023675	Zfp677	83	42.899
MGP_NZOHlLtJ_G0029511	Zbtb17	56	41.518	MGP_NZOHlLtJ_G0020694	Zkscan4	51	41.518
MGP_NZOHlLtJ_G0029511	Zbtb17	56	42.638	MGP_NZOHlLtJ_G0034991	Zfp872	83	41.964
MGP_NZOHlLtJ_G0029511	Zbtb17	69	44.706	MGP_NZOHlLtJ_G0032468	Zfp420	97	44.706
MGP_NZOHlLtJ_G0029511	Zbtb17	56	35.083	MGP_NZOHlLtJ_G0027372	Zfp334	65	39.216
MGP_NZOHlLtJ_G0029511	Zbtb17	61	42.727	MGP_NZOHlLtJ_G0025063	Zfp236	69	42.727
MGP_NZOHlLtJ_G0029511	Zbtb17	71	39.572	MGP_NZOHlLtJ_G0023698	Zfp945	93	39.583
MGP_NZOHlLtJ_G0029511	Zbtb17	79	46.354	MGP_NZOHlLtJ_G0027599	Mynn	85	46.354
MGP_NZOHlLtJ_G0029511	Zbtb17	54	46.512	MGP_NZOHlLtJ_G0034655	Zfp1	67	42.083
MGP_NZOHlLtJ_G0029511	Zbtb17	62	34.819	MGP_NZOHlLtJ_G0034497	Zfp319	91	37.805
MGP_NZOHlLtJ_G0029511	Zbtb17	59	32.021	MGP_NZOHlLtJ_G0032333	Zfp574	71	38.532
MGP_NZOHlLtJ_G0029511	Zbtb17	63	42.164	MGP_NZOHlLtJ_G0023686	Zfp820	83	42.164
MGP_NZOHlLtJ_G0029511	Zbtb17	56	40.741	MGP_NZOHlLtJ_G0032049	Zfp865	78	35.743
MGP_NZOHlLtJ_G0029511	Zbtb17	58	47.260	MGP_NZOHlLtJ_G0032591	-	54	47.260