EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0029572 (Gene tree)
Gene ID: -
Gene Symbol: Plod1
Alias: 2410042F05Rik|AI854890|AV007929|LH1|Lh1|Plod|lysyl hydroxylase 1
Full Name: procollagen-lysine%2C 2-oxoglutarate 5-dioxygenase 1
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Minus strand
Length: 27912 bases
Position: chr4:149760540-149788451
Accession: 99907
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0069849	2OG-FeII_Oxy	PF03171.20	4.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0069849	-	3251	-	MGP_NZOHlLtJ_P0069849	728 (aa)	-	Q9R0E2
MGP_NZOHlLtJ_T0069850	-	805	-	MGP_NZOHlLtJ_P0069850	268 (aa)	-	-
MGP_NZOHlLtJ_T0069851	-	4171	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0069852	-	527	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0069853	-	1059	-	MGP_NZOHlLtJ_P0069853	226 (aa)	-	-
MGP_NZOHlLtJ_T0069854	-	358	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0029572's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0029572's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0029572	Plod1	99	58.904	MGP_NZOHlLtJ_G0035644	Plod2	95	60.171
MGP_NZOHlLtJ_G0029572	Plod1	97	60.369	MGP_NZOHlLtJ_G0030684	Plod3	95	60.369