EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
Description
Ensembl ID
MGP_NZOHlLtJ_G0030051 (Gene tree)
Gene ID
-
Gene Symbol
Rbm47
Alias
9530077J19Rik
Full Name
RNA binding motif protein 47
Gene Type
protein_coding
Species
Mus_musculus_nzohlltj
Status
putative
Strand
Minus strand
Length
166807 bases
Position
chr5:64942369-65109175
Accession
2384294
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
MGP_NZOHlLtJ_P0072577RRM_1PF00076.223.6e-3713
MGP_NZOHlLtJ_P0072577RRM_1PF00076.223.6e-3723
MGP_NZOHlLtJ_P0072577RRM_1PF00076.223.6e-3733
MGP_NZOHlLtJ_P0072573RRM_1PF00076.225.8e-3713
MGP_NZOHlLtJ_P0072573RRM_1PF00076.225.8e-3723
MGP_NZOHlLtJ_P0072573RRM_1PF00076.225.8e-3733
MGP_NZOHlLtJ_P0072574RRM_1PF00076.225.8e-3713
MGP_NZOHlLtJ_P0072574RRM_1PF00076.225.8e-3723
MGP_NZOHlLtJ_P0072574RRM_1PF00076.225.8e-3733
MGP_NZOHlLtJ_P0072575RRM_1PF00076.225.8e-3713
MGP_NZOHlLtJ_P0072575RRM_1PF00076.225.8e-3723
MGP_NZOHlLtJ_P0072575RRM_1PF00076.225.8e-3733
MGP_NZOHlLtJ_P0072576RRM_1PF00076.225.8e-3713
MGP_NZOHlLtJ_P0072576RRM_1PF00076.225.8e-3723
MGP_NZOHlLtJ_P0072576RRM_1PF00076.225.8e-3733
MGP_NZOHlLtJ_P0072578RRM_1PF00076.225.8e-3713
MGP_NZOHlLtJ_P0072578RRM_1PF00076.225.8e-3723
MGP_NZOHlLtJ_P0072578RRM_1PF00076.225.8e-3733
MGP_NZOHlLtJ_P0072579RRM_1PF00076.225.8e-3713
MGP_NZOHlLtJ_P0072579RRM_1PF00076.225.8e-3723
MGP_NZOHlLtJ_P0072579RRM_1PF00076.225.8e-3733
MGP_NZOHlLtJ_P0072581RRM_1PF00076.223e-1511
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
MGP_NZOHlLtJ_T0072577-2955-MGP_NZOHlLtJ_P0072577521 (aa)--
MGP_NZOHlLtJ_T0072576-4878-MGP_NZOHlLtJ_P0072576590 (aa)--
MGP_NZOHlLtJ_T0072575-4626-MGP_NZOHlLtJ_P0072575590 (aa)--
MGP_NZOHlLtJ_T0072574-5194-MGP_NZOHlLtJ_P0072574590 (aa)--
MGP_NZOHlLtJ_T0072573-4686XM_006503956MGP_NZOHlLtJ_P0072573590 (aa)XP_006504019Q91WT8
MGP_NZOHlLtJ_T0072586-464--- (aa)--
MGP_NZOHlLtJ_T0072584-530-MGP_NZOHlLtJ_P00725846 (aa)--
MGP_NZOHlLtJ_T0072585-452--- (aa)--
MGP_NZOHlLtJ_T0072582-504--- (aa)--
MGP_NZOHlLtJ_T0072583-332-MGP_NZOHlLtJ_P007258313 (aa)--
MGP_NZOHlLtJ_T0072579-2177-MGP_NZOHlLtJ_P0072579590 (aa)--
MGP_NZOHlLtJ_T0072578-3162-MGP_NZOHlLtJ_P0072578590 (aa)--
MGP_NZOHlLtJ_T0072580-2393--- (aa)--
MGP_NZOHlLtJ_T0072581-703-MGP_NZOHlLtJ_P0072581158 (aa)--
Gene Model
Click here to download MGP_NZOHlLtJ_G0030051's gene model file
Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0030051's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
MGP_NZOHlLtJ_G0030051Rbm478859.859MGP_NZOHlLtJ_G0029427Hnrnpr7248.642
MGP_NZOHlLtJ_G0030051Rbm479473.649MGP_NZOHlLtJ_G0027806Rbm466672.468
MGP_NZOHlLtJ_G0030051Rbm478862.069MGP_NZOHlLtJ_G0035622Syncrip7557.522
MGP_NZOHlLtJ_G0030051Rbm478150.781MGP_NZOHlLtJ_G0024746Dnd15841.748
MGP_NZOHlLtJ_G0030051Rbm478967.376MGP_NZOHlLtJ_G0025509A1cf7557.816

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