EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Description

Ensembl ID: MGP_NZOHlLtJ_G0030222 (Gene tree)
Gene ID: -
Gene Symbol: Sept11
Alias: 6230410I01Rik|AW548875|D5Ertd606e
Full Name: septin 11
Gene Type: protein_coding
Species: Mus_musculus_nzohlltj
Status: putative
Strand: Plus strand
Length: 94213 bases
Position: chr5:93049864-93144076
Accession: 1277214
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
MGP_NZOHlLtJ_P0073386	MMR_HSR1	PF01926.23	6.9e-07	1	1
MGP_NZOHlLtJ_P0073384	MMR_HSR1	PF01926.23	2.1e-06	1	1
MGP_NZOHlLtJ_P0073382	MMR_HSR1	PF01926.23	2.2e-06	1	1
MGP_NZOHlLtJ_P0073387	MMR_HSR1	PF01926.23	2.2e-06	1	1
MGP_NZOHlLtJ_P0073389	MMR_HSR1	PF01926.23	2.2e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
MGP_NZOHlLtJ_T0073389	-	1380	-	MGP_NZOHlLtJ_P0073389	432 (aa)	-	-
MGP_NZOHlLtJ_T0073388	-	434	-	MGP_NZOHlLtJ_P0073388	97 (aa)	-	-
MGP_NZOHlLtJ_T0073387	-	2428	-	MGP_NZOHlLtJ_P0073387	431 (aa)	-	-
MGP_NZOHlLtJ_T0073386	-	1792	-	MGP_NZOHlLtJ_P0073386	425 (aa)	-	-
MGP_NZOHlLtJ_T0073385	-	1066	-	MGP_NZOHlLtJ_P0073385	204 (aa)	-	-
MGP_NZOHlLtJ_T0073384	-	3478	-	MGP_NZOHlLtJ_P0073384	425 (aa)	-	-
MGP_NZOHlLtJ_T0073383	-	640	-	-	- (aa)	-	-
MGP_NZOHlLtJ_T0073382	-	5028	XM_006535104	MGP_NZOHlLtJ_P0073382	429 (aa)	XP_006535161	Q8C1B7
MGP_NZOHlLtJ_T0073390	-	1119	-	-	- (aa)	-	-

Gene Model

Click here to download MGP_NZOHlLtJ_G0030222's gene model file

Protein-Protein Interaction (PPI)

Clik here to download MGP_NZOHlLtJ_G0030222's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
MGP_NZOHlLtJ_G0030222	Sept11	69	43.234	MGP_NZOHlLtJ_G0016778	Sept2	100	42.202
MGP_NZOHlLtJ_G0030222	Sept11	76	40.762	MGP_NZOHlLtJ_G0033539	Sept1	100	40.816
MGP_NZOHlLtJ_G0030222	Sept11	76	41.493	MGP_NZOHlLtJ_G0023042	Sept5	90	40.828
MGP_NZOHlLtJ_G0030222	Sept11	99	39.954	MGP_NZOHlLtJ_G0035007	Sept7	80	41.737
MGP_NZOHlLtJ_G0030222	Sept11	67	43.878	MGP_NZOHlLtJ_G0019338	Sept4	85	45.000
MGP_NZOHlLtJ_G0030222	Sept11	60	38.077	MGP_NZOHlLtJ_G0022907	Sept12	82	37.931
MGP_NZOHlLtJ_G0030222	Sept11	67	42.953	MGP_NZOHlLtJ_G0019877	Sept9	81	46.970
MGP_NZOHlLtJ_G0030222	Sept11	69	44.000	MGP_NZOHlLtJ_G0022563	Sept3	89	44.000
MGP_NZOHlLtJ_G0030222	Sept11	100	82.201	MGP_NZOHlLtJ_G0036141	Sept6	100	82.028
MGP_NZOHlLtJ_G0030222	Sept11	99	79.157	MGP_NZOHlLtJ_G0018732	Sept8	88	81.915
MGP_NZOHlLtJ_G0030222	Sept11	98	72.771	MGP_NZOHlLtJ_G0017686	Sept10	85	76.712